Title of Invention

A COMPOSITION COMPRISING A NEISSERIAL LOS

Abstract The present invention relates to Neisserial Lipo-Oligo-Saccharides (LOS) that comprise a tri-saccharide outer core that shows increased binding to the DC-SIGN receptor on dendritic cells, as a result of which the Neisserial LOS's of the invention have increased immunostimulatory activity. The tri-saccharide outer core of the Neiserial LOS's combined with a Lipid A moiety with reduced toxicity is useful as an adjuvant in vaccine preparations.
Full Text WO 2005/107798 PCT/NL2005/000358

field of the invention
The present invention relates to Neisserial Lipo-Oligo-Saccharides (LOS) that have increased immunostimulatory activity. The Neisserial LOS's of the invention comprise a tri-saccharide outer core that shows increased binding to a receptor on dendritic cells. The tri-saccharide outer core of the Neisserial LOS's combined with a Lipid A moiety with reduced toxicity is useful as an adjuvant in vaccine preparations.
Background of the invention
Neisseria rneningitidis LPS has received attention as a potential vaccine candidate due to its capacity to induce LPS-specific immune responses as well as being a potent adjuvant However, the endotoxic activity of LPS has limited its use in vaccines so far.
Meningococcal LPS is composed of a hydrophobic lipid A portion mat anchors it to the bacterial outer membrane and a hydrophilic oligosaccharide core, which is exposed to the bacterial surface (Figure 1). Inclusion of the native oligosaccharide chain in vaccine preparations is unadvisable due to its structural similarity with host glycolipid antigens. Genetic engineering of the LPS oligosaccharide biosynthesis pathways has enabled the production of series of N. meningitidis mutants expressing truncated oligosaccharide chains (Figure 1). The endotoxic and adjuvant properties of LPS appear to be determined by the lipid A part of the molecule. We have previously generated a unique set of N. meningitidis lipid A mutants with highly improved pharmacological properties. In particular, inactivation of the lpxLl (htrBl) gene involved in lipid A acyloxyacylation resulted in the isolation of a lipid A mutant expressing penta-acylated instead of hexa-acylated lipid A with reduced endotoxic but retained adjuvant activity. In addition, a N. meningitidis mutant completely lacking LPS due to inactivation of the meningococcal lpxA gene was isolated. Thus, modification of the lipid A portion as well as the oligosaccharide portion of meningococcal LPS has opened new possibilities for development of meningococcal vaccines.
Dendritic cells (DC) have become of major interest because of their role in the initiation of an immune response both during natural infection and in response to
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vaccination. Immune responses to bacteria are initiated by DC, which phagocytose and process bacterial antigens for presentation to T cells. We have shown recently that N. meningitidis LPS plays a major role during interactions with human DC. Moreover LPS is required for internalisation of the bacteria and full activation of the DC.
Description of the invention
Definitions
Adjuvants are herein defined to include any substance or compound that, when used in combination with an antigen, to immunise a mammal, preferably a human, stimulates the immune system, thereby provoking, enhancing or facilitating the immune response against the antigen, preferably without generating a specific immune response to the adjuvant itself. Preferred adjuvants enhance the immune response against a given antigen by at least a factor of 1.5, 2, 2.5, 5, 10 or 20, as compared to the immune response generated against the antigen rander the same conditions but in the absence of the adjuvant Tests for deterrnining the statistical average enhancement of the immune response against a given antigen as produced by an adjuvant in a group of animals or humans over a corresponding control group are available in the art The adjuvant preferably is capable of enhancing the immune response against at least two different antigens. The adjuvant of the invention will usually be a compound that is foreign to a mammal, thereby excluding immunostimulatory compounds that are endogenous to mammals, such as e.g. interleukins, interferons and other hormones.
Detailed description of the invention
The present invention is based on the surprising discovery that a Neisserial LPS with a particular tri-saccharide outer core structure, shows increased binding and internalisation by human dendritic cells (DCs). Binding and internaUsation of the tri-saccharide-containing LPS, or rather tri-saccharide-containing LOS (lipo-oligosaccaride), is mediated by the C-type lectin DC-SIGN that is expressed on human DCs and results in activation and maturation of the DCs at increased rate. The improved immunostimulatory activity of this new Neisserial tri-saccharide-containing LOS allows its use as a potent adjuvant in immunisation and vaccination.
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Thus, in a first aspect the invention relates to a method for immunisation or vaccination of a mammal with an antigen, the method comprising the administration (to the mammal) of the antigen and a Neisserial LOS is represented by the formula (I):
KDO •2•4
GlcNAc •1•3 Gal •1•4 Glc •1•4 Hep •1•5 KDO - LA
•1•3
Hep•PEA (3 or 6) • 1•2 GlcNAc,
whereby LA is a wild-type lipid A moiety, preferably from a Neisseria strain, or more preferably a lipid A moiety with reduced toxicity.
In formula (I), GlcNAc defines D-glucosamine; Gal defines D-galactose; Glc defines D-glucose; Hep defines D-heptose; KDO defines 3-deoxy-D-manno-octulosonic acid; PEA defines phospho-ethanolamine; ß1->4 defines a ß-glycosidic linkage between the first and fourth positions; ß1->3 defines a ß-glycosidic linkage between the first and third positions; al->5 defines a a-glycosidic linkage between the first and fifth positions; al->3 defines a a-glycosidic linkage between the first and third positions; al->2 defines a a-glycosidic linkage between the first and second positions; a2->4 defines a a-glycosidic Unkage between the second and fourth positions; PEA(3 or 6) indicates that the phospho-ethanolamine may be linked at either the third or sixth position of the heptose or may be absent altogether.
The invention thus relates to the use of a Neisserial LOS as defined above in the manufacture of a medicament for immunisation or vaccination of a mammal. Preferably the Neisserial LOS of the invention is used as an adjuvant. More preferably, the Neisserial LOS is used in combuiation with an antigen in the manufacture of a medicament for raising an immune response against (or vaccination with) the antigen in the mammal.
In the methods and uses of the invention, the mammal preferably is a human. The antigen preferably is an antigen from, or produced by a bacterium, a virus, a fungus, a parasite, a cancer cell or an allergen as further defined below. The antigen and Neisserial LOS are preferably used in the treatment and/or prevention of an infectious disease caused by the bacterium, virus, fungus, or parasite, or the tumor caused by the cancer cell, or the allergy caused by the allergen.

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In preferred embodiments of the invention, the Neisserial LOS of the invention has a modified Lipid A moiety (LA) with reduced toxicity The toxicity of the modified LA preferably is less than the toxicity of a corresponding wild-type LA, more preferably the modified LA is less than 90, 80, 60, 40, 20, 10, 5, 2, 1, 0.5 or 0.2% of the toxicity of the wild-type LA. The toxicities of wild-type and various modified LA's with reduced toxicity may be determined in any suitable assay known in the art A preferred assay for determining the toxicity, i.e. the biological activity of the LA's or Neisserial LOS's of the invention is the WEHI test for TNF-alpha induction in the MM6 macrophage cell line (Espevik and Niessen, 1986, J.Immunol.Methods 95: 99-105; Ziegler-Heitbrock et al., 1988, IntJ.Cancer 41: 456-461).
On the other hand, the Neisserial LOS of the invention having an LA with reduced toxicity should still have sufficient immunostimulatory activity, i.e. adjuvant activity. The Neisserial LOS of the invention with reduced toxicity preferably has at least 10, 20, 40, 80, 90 or 100% of the immunostimulatory activity of the corresponding Neisserial LOS with a wild-type LA, whereby the immunostimulatory activity is determined by measuring the production of at least one cytokine or the expression of at least one costimulatory molecule as described in Example 3 herein.
Neisserial LOS's having reduced toxicity of the Lipid A moiety but retaining (part of) the adjuvant activity, may e.g. be obtained from genetically modified Gram negative pathogens and as reviewed in WO02/09746. In particular, preferred Neisserial LOS's with LA's with reduced toxicity include: (a) LOS's with a lipid A moiety as obtainable from a Neisseria strain with a mutation that causes a reduction or inactivation of the expression of one or more of the lpxLl and lpxL2 genes (formerly known as htrB and msbB) genes or homologues thereof (see e.g. EP 1 127 137; US 5,997,881); (b) LOS's with a lipid A moiety as obtainable by removal of one or more secondary O-linked esterified fatty acids from a wild-type Lipid A moiety by treatment with an acyloxyhydrolase or alkaline hydrolysis (US 5,103,661; Erwin et al., 1991, Infect. Immun. 59: 1881-87); (c) LOS's with a lipid A moiety as obtainable by hydrazine treatment of a wild-type; Lipid A moiety (Gu et al., 1996, Infect. Immun. 64: 4047-53; Polotsky et al., 1994, Infect. Immun. 62: 210-14; Gu et al., 1998, Infect, hnmun. 66:1891-97, 1998); (d) LOS's with a lipid A moiety as obtainable by dephosphorylation of a Lipid A moiety with an alkaline phosphatase (US 6,290,952); and, (e) LOS's obtainable by enzymatic dephosphorylation or deacylation of LOS
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produced in Neisserial host in which a heterologous lpxE or pagL gene is expressed. Reduced expression is herein understood to mean increased or reduced when compared to a corresponding wild-type strain, whereby the expression level preferably at least differs by a factor 2, 5 or 10 from the corresponding wild-type strain.
Preferred LA's with reduced toxicity thus include LA with a secondary Cn-acyl only on the reducing glucosamine, LA with a secondary C12-acyl only on the non-reducing glucosamine, LA lacking both secondary C12-acyl groups, LA's lacking one or more phosphate groups from either the 1 or 4' position and combinations of the aforementioned deacylations and dephosphorylations.
In a further aspect the invention relates to a Neisserial LOS that is represented by the formula (I):
KDO
• 2•4
GlcNAc •1•3 Gal •1•4 Glc •1•4 Hep •1•5 KDO - LA
•1•3
Hep•PKA (3 or 6) • 1•2 GlcNAc,
whereby preferably LA is a Lipid A moiety with reduced toxicity as defined above.
In yet another aspect the: invention relates to a composition comprising a Neisserial LOS as herein defined above, and a pharmaceutically acceptable carrier. Preferably, the composition further comprises an antigen that is from or produced by a bacterium, a virus, a fungus, a parasite, a cancer cell or an allergen. The pharmaceutical compositions may further comprise pharmaceutically acceptable stabilizing agents, osmotic agents, buffering agents, dispersing agents, and the like. The preferred form of the pharmaceutical composition depends on the intended mode of administration and therapeutic application. The pharmaceutical carrier can be any compatible, non-toxic substance suitable to deliver the active ingredients, i.e. the Neisserial LOS and the antigen, to the patient. Pharmaceutically acceptable carriers for intranasal delivery are exemplified by water, buffered saline solutions, glycerin, polysorbate 20, cremophor EL, and an aqueous mixture of caprylic/capric glyceride, and may be buffered to provide a neutral pH environment. Pharmaceutically acceptable earners for parenteral delivery are exemplified by sterile buffered 0.9% NaCl or 5% glucose optionally
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supplemented with a 20% albumin. Preparations for parental administration must be sterile. The parental route for administration of the active ingredients is in accord with known methods, e.g. injection or infusion by subcutaneous, intravenous, intraperitoneal, intramuscular, intraarterial or intralesional routes. The compositions of the invention are preferably administered by bolus injection. A typical pharmaceutical composition for intramuscular injection would be made up to contain, for example, 1 -10 ml of phosphate buffered saline and 1 to 100 µg, preferably 15-45 µg of antigen and 1 to 100 µg, preferably 15-45 µg of the Neisserial LOS of the invention. For oral administration, the active ingredient can be administered in liquid dosage forms, such as elixirs, syrups, and suspensions. Liquid dosage forms for oral administration can contain coloring and flavoring to increase patient acceptance. Methods for preparing parenterally, orally or intranasally adrninistrable compositions are well known in the art and described in more detail in various sources, including, for example, Remington's Pharmaceutical Science (15th ed., Mack Publishing, Easton, PA, 1980) (incorporated by reference in its entirety for all purposes).
The antigen in the composition of the invention preferably is an antigen that is from or produced by a bacterium, a virus, a fungus, a parasite, a cancer cell or an allergen. Viral antigens that may be combined with the Neisserial LOS of the invention can be derived from all sorts of viruses, non-limiting examples of such viruses are: Retroviridae such as Human Immunodeficiency virus (HIV); a rubellavirus; paramyxoviridae such as paraiufluenza viruses, measles, mumps, respiratory syncytial virus, human metapneumovirus; flaviviridae such as yellow fever virus, dengue virus, Hepatitis C Virus (HCV), Japanese Encephalitis Virus (JEV), tick-borne encephalitis, St. Louis encephalitis or West Nile virus; Herpesviridae such as Herpes Simplex virus, cytomegalovirus, Epstein-Ban- virus; Bunyaviridae; Arenaviridae; Hantaviridae such as Hantaan; Coronaviridae; Papovaviridae such as human Papillomavirus; Rhabdoviridae such as rabies virus. Coronaviridae such as human coronavirus; Alphaviridae, Arteriviridae, filoviridae such as Ebolavirus, Arenaviridae, poxviridae such as smallpox virus, and African swine fever virus. Likewise the Neisserial LOS's of the invention may be combined with antigens derived from pathogenic bacteria, fungi (including yeasts), or parasites. Such antigens include bacterial antigens of e.g. Helicobacter, such as H. pylori, Neisseria, such as N. mengitidis, Haemophilus, such as H. influenza, Bordetella, such as B. pertussis, Chlamydia, Streptococcus, such as
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Streptococcus sp. serotype A, Vibrio, such as V cholera, Gram-negative enteric pathogens including e.g. Salmonella, Shigella, Campylobacter and Escherichia, as well as antigen from bacteria causing anthrax, leprosy, tuberculosis, diphtheria, Lyme disease, syphilis, typhoid fever, and gonorrhea. Antigens from parasites e.g. include antigens from protozoans, such as Babeosis bovis, Plasmodium, Leishmania spp. Toxoplasma gondii, and Trypanosoma, such as T. cruzi. Fungal antigens may include antigens from fungi such as Aspergillus sp., Candida albicans, Cryptococcus, such as e.g C. neoformans, and Histoplasma capsulatum.
Although vaccination is generally applied for the prophylactic protection against pathogens or for the treatment of diseases following pathogenic infection, the person skilled in the art is aware of the application of vaccines for tumor-treatment. Moreover, an increasing number of tumor-specific proteins are found to be proper entities that can be targeted by human or humanized eintibodies. Such tumor-specific proteins are also within the scope of the present invention. Many tumor specific antigens are known in the art. Therefore, in one preferred embodiment, the invention provides compositions comprising a tumor-specific antigen and a Neisserial LOS as defined above. Suitable tumor antigens include e.g. carcinoembryonic antigen, prostate-specific membrane antigen, prostate specific antigen, protein MZ2-E, polymorphic epithelial mucin (PEM), folate-binding-protein LK26, (truncated) epidermal growth factor receptor (EGRF), HER2, Thomsen-Friedenreich (T) antigen, GM-2 and GD-2 gangliosides, Ep-CAM, mucin-1, epithialial glycoprotein-2, and colon specific antigen.
In addition, antigens can be targeted to DCs in order to induce tolerance in the prevention of auto-immune disease. Such allergens are also within the scope of the present invention.
In another aspect the invention relates to methods for producing a Neisserial LOS as defined above. A preferred method comprises the steps of: (a) culturing a N. menigitidis strain, whereby the strain expresses a Neisserial LOS of immunotype L2, L3 or L4 and lacks an active IgtB gene, or expresses a Neisserial LOS of immunotype L6, and whereby the strain carries a mutation that inactivates or reduces the expression of one or more of the lpxLl and lpxL2 genes; and, (b) recovery of the Neisserial LOS. Alternatively, the method comprising the steps of: (a) culturing a N. menigitidis strain, whereby the strain expresses a Neisserial LOS of immunotype L2, L3 or L4 and lacks an active IgtB gene, or expresses a Neisserial LOS of immunotype L6; (b) recovery of
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the Neisserial LOS; and, (c) treating the Neisserial LOS with at least one of hydrazine, an alkaline phosphatase or acyloxyhydrolase to reduce the toxicity of the lipid A moiety. In the method, the order of steps (b) and (c) may be exchanged. In a preferred method, in step c) the toxicity is reduced until less than 80% of the toxicity of the wild-type Neisserial LOS, as determined in a WEHI assay as described above.
In yet another aspect the invention relates to Gram-negative OMV's (Outer Membrane Vessicles) or blebs comprising the Neisserial LOS's as defined above. Means and methods for producing Gram-negative OMV's or blebs are described in WO 02/09746. Gram-negative blebs thus obtained may be combined with the Neisserial LOS of the invention to produce Gram-negative blebs comprising the Neisserial LOS's. Alternatively the blebs may be produced from a Neisserial strain as defined above, that is capable of producing a Neisserial LOS of the invention. The Gram-negative blebs comprising may further be combiined with an antigen as described above and/or with pharmaceutically acceptable carriers as described above.
Description of the figures
Figure 1; Schematic represeniation of N. meningitidis WT L3 LPS and its oligosaccharide mutants that can be generated by insertional inactivation of the genes (indicated in italic) encoding the glycosyltransferases.
Figure 2: Dendritic cells (DC) were cultured with FITC-labelled bacteria at a ratio of 1:50 for 24h. At the indicated time points samples were taking to measure association of the bacteria to DCs by FACS. A representative of three separate experiments from three different donors is shown.
Figure 3: DCs were stimulated with FITC-labelled bacteria at a ratio of 1:50 for I8h in the presence of brefeldin A and then stained for intracellular TNF-a and EL-12. The dot plots show percentage of DC associated with bacteria not producing (lower right quadrant) or producing (upper right quadrant) intracellular cytokines. Figure 4: TNF-a, IL-12, Il-lß, IL-10 and IL-6 production by DC in response to the N. meningitidis WT and mutants were measured in culture supernatants by ELISA after 18h of co-culture. Mean and SEM of three separate experiments is shown. Figure 5: CD40 and CD86 expression after 18h of coculture of the N. meningitidis WT and mutants with DCs as indicated by Median Fluorescence Intensity (MFI).
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Figure 6: Binding of C-type-lectin-Fc molecules to N. meninigitidis WT and mutants
in a soluble adhesion assay.
Figure 7: DC association of the N meninigitidis WT and igtB mutant in the presence
and absence of 20 microgram anti-DC-SIGN antibody AZN-D1 per ml.
Figure 8: DC-driven Thl/Th2-cell proliferation:
DC were incubated with N. meningitidis wild type H44/76, the IgtB mutant, E. coli
LPS, poly I;C or PGE2 for 48 h, washed and (A) analyzed for maturation markers
(mean and SEM of three separate experiments) or (B) co-cultured with highly purified
CD45RA+CD4+ T cells. Quiescent T cells were restimulated with PMA and ionomycin,
and intracellular IL-4 (grey) and IFN-? (black) was analyzed on a single cell basis by
flow cytometry. Data from three different donors are shown.
Figure 9: DC association and cytokine induction of live bacteria. Dendritic ceils (DC) were cultured with FITC-labelled N. meningitidis wild type and LPS mutants at a ratio of 1:100. At the indicated time points samples were taking to measure association of the bacteria to DCs by FACS. Results are shown with cells from two different donors.
Examples
1 Materials and Methods 1.1 Bacterial strains
The oligosaccharide core and lipid A mutants were derived from the wild type (WT) group B N. meningitidis H44/76 and have been described previously:

Strain or mutant
Reference
H44/76
Holten, 1979, J.CHn.Microbiol.9:186-188
galE
Jennings et al., 1993, MoLMicrobiol. 10: 361-369
IgtB
Jennings et al., 1995, MoLMicrobiol. 18:
729-740
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lpxLl van der Ley et al., 2001, Infect.Immun.
1 69: 5981-5990
Structure of the oligosaccharide core mutants used in this study are shown in Figure 1. All strains were grown on gonococcal agar (Difco, Basingstoke, UK) supplemented with Vitox (Oxoid Ltd., Basingstoke, UK) in an atmosphere of 6% CO2 in air at 36 ° C. The bacteria were used in stationary phase after culture for 18 hours. Suspensions of bacteria were prepared in RPMI 1640 medium without phenol red (Gibco, Paisley, UK), and their optical density measured at 540nm. Optical density of 1 was calculated to correspond to 109 organisms/ml. Bacteria were fixed in 0.5% paraformaldehyde (PFA) in Phosphate Buffered Saline (PBS) for 15 minutes and washed thoroughly in RPMI medium. FITC labelled bacteria were prepared by incubation with 0.5mg/ml of FITC (Sigma, Poole, UK) for 20 min at 37°C followed by extensive washing.
1.2 Cells
DCs were generated from human peripheral blood mononuclear cells (PBMC) as described previously (F. Sallusto and A. Lanzavecchia, 1994, J.Exp.Med. 179: 1109-1118; H. Uronen-Hansson et al., 2004., Immunology 111: 173-178). In brief, monocytes were prepared from PBMC by centrirugation over multistep Percoll gradients. The monocyte fraction was >95% CD14+/CD3-/CD19-. To generate DCs, monocytes were incubated for 7 days in RPMI supplemented with 10% heat inactivated FCS, 2.4mM L-glutamine, lOOU/ml Penicillin-streptomycin (all from GIBCO, Paisley UK), lOOng/ml of human recombinant GM-CSF and 50ng/ml of human recombinant IL-4 (Schering-Plough, Welwyn Garden City, Herts UK). Immature DCs prepared in this way were CD140W, CD83-VC, CD86lOW, CD25-ve. They also expressed HLA DR, HLA DQ, HLA Class I, CD40 and CDla, and were negative for both CD19 and CD3.
DCs at a concentration of 5xl05/ml were cultured with N. meningitidis H44/76 bacteria at DC/bacteria ratio of 1:50 and 1:200 (as indicated in figure legend) in RPMI 1640 supplemented with 10% FCS. When intracellular cytoldnes were to be measured, the protein transport inhibitor Brefeldin A (Sigma, Poole, UK) was added at l0µg/mL..
The binding specificity of the IgtB mutant to DCs was determined by incubating immature DCs with 20 ug/ml anti-DC-SIGN mAb AZN-D1 for 30 min at 37°C, and subsequently with wild-type and mutant bacteria for 45 min at 37°C.
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1.3 DC binding and internalisation
DC binding and internalisation of bacteria was determined by a combination bf flow cytometry and confocal microscopy. For detection by flow cytometry, DCs were incubated with FITC labelled bacteria for periods of time between 30 minutes and 24 hours, fixed in FACSFix (BD), washed and analysed on a FACSCalibur. DCs associated with bacteria were easily identified by fluorescence within the DC gated population. For confocal microscopy, DCs stimulated with FITC labelled N. meningitidis allowed to adhere for 10 min to an adhesion slide (Bio-Rad Laboratories Ltd., Herts, UK). To stop internalisation, DCs were fixed with 4% PFA for 10 min. DCs were visualized by staining with 5µg/ml of anti MHC Class H monoclonal antibodies (Dako, Glostrup, Denmark). After washing, bound antibody was detected with 5µg/ml of Texas Red -conjugated goat anti-mouse antibody (Molecular probes) for 1h. The slides were washed and mounted in Citifluor (Citifluor Ltd, UK). Confocal images were obtained using a Leica SP2 confocal laser scanning microscope system (Leica, Milton Keynes, UK) fitted with appropriate filter sets. To identify intracellular bacteria, 15-20 optical sections (0.2-0.50µm) spanning the entire DCs were projected and superimposed with Leica confocal imaging software.
1.4 Cvtokine measurements
To measure intracellular cytokine production, DCs were fixed with 4% PFA in PBS for 15 minutes, washed in PBS containing 0.1% sodium azide and 0.5% BSA (all from Sigma) and permeabilised in 25 µl Permeabilisation solution (Caltag). Cells were then incubated with monoclonal antibodies to TNF-a (Becton Dickinson BD, Oxford UK) and IL-12 p40/70 (Pharmingen) or isotype matched controls for 30 minutes at room temperature in the dark. The cells were then washed twice in PBS, fixed in CellFix (Becton Dickinson) and analysed by flow cytometry on a FACScalibur using Cell Quest software (Becton Dickinson). DCs made up a distinct population identified by forward and right angle scattering. At least 95% of cells in this population were DCs as defined by their expression of MHC II, CDla, CD25, CD80, CD83 and CD86. A rninimum of 3000 events within the gates corresponding to DC was collected for analysis. For ELISA assays of soluble cytokines, CytoSets(tm) ELISA kits (Biosource
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Europe S.A, Nivelles Belgium) for human IL-12, TNF-a and IL-10, IL6 and ILlß were used according to manufacturer's instructions.
1.5 Soluble C-type-lectin-Fc Adhesion Assay
C-type-lectin-Fc molecules consist of the extracellular portion of the C-type lectin receptor (DC-SIGN, MGL and Dectin-IB) fused at the COOH terminus to a human IgGl-Fc fragment (T. Geijtenbeek et al, 2003, J.Exp.Med. 197: 7-17). The soluble C-type-lectin-Fc adhesion assay was performed as follows. Whole cells (OD540=0.1) were coated onto ELISA plates (100 ul/well) for 18 hours at RT, followed by blocking with 1% BSA for 30 min at 37°C. Soluble C-type-lectin-Fc supernatant was added for 2h at RT. Unbound C-type-lectin-Fc was washed away and binding was determined by anti-IgGl ELISA.
1.6 DC-driven Thl/Th2 differentation
DC were cultured from monocytes of healthy donors in Iscove's Modified Dulbecco's Medium (Gibco), supplemented with 10% FCS (BioWithaker, Verviers, Belgium), 500 U/ml IL-4 and 800 U/ml GM-CSF (both from Schering-Plough). At day 6 DC maturation was induced with N. meningitidis wild type and IgtB mutant at a multiplicity of infection of 10. The following positive controls were included in the assay (i) mixed Thl/Th2 response, 10 µg/ml Escherichia coli LPS (Sigma-Aldrich, St. Louis, MO) (ii) Thl differentiation, 20 µg/ml poly I:C (Sigma-Aldrich) and (iii) Th2 differentiation, 10 µg/ml PGE2 10 µg/ml LPS (Sigma-Aldrich). At day 2 DC were analyzed for maturation markers (CD80, CD83, CD86 sand HLA-DR) by flowcytometry. To evaluate T cell differentiation, matured DC were incubated with CD45RA+/CD4+ T cells (5.103 T cells/ 20.103 DC). At day 12-15, quiescent T cells were restimulated with 10 ng/ml PMA ( Sigma-Aldrich) and 1 ng/ml ionomycin (Sigma-Aldrich) for 6 hours. After 1 hour 10 ng /ml Brefeldin A (Sigma-Aldrich) was added to the T cells. Single cell production of IL-4 and IFN-y was determined by intracellular flowcytometric analysis. Cells were fixed in 2% PFA, permeabilized with 0.5% saponin (Sigma-Aldrich) and stained with anti-human IFN- y-FITC and anti-human IL-4-PE (BD Pharmingen, San Diego, CA).
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2. Example: Binding and internatisation of oligosaccharide core mutant strains of
Neisseria meninsitidis by DCs
A flow cytometric technique was used to investigate binding and intemalisation of WT N. meningitidis, the oligosaccharide mutants and the LPS-deficient mutant by human DCs. Immature DCs were co-cultured with FITC-labelled mutant strains derived from the WT N. meningitidis H44/76 at a DC/bacteria ratio of 1:50 (Figure 2) and 1:200 (data not shown) and analysed by FACS for the presence of DC associated FITC-labelled bacteria. Time and dose dependent increase in DC association was observed for both WT and the oligosaccharide mutants. Hardly any DC association was found for the LPS-deficient mutant in the first six hours of the time course. The IgtB mutant showed consistently higher DC association than the WT or the galE mutants at both concentrations.
To discriminate between bacterial binding and internalisation, we next used confocal microscopy to study DC intemalisation of N. meningitidis WT and mutants (not shown). FITC bacteria were easily detected as green small particles on slides. MHC Class II staining was used to visualise the DCs. The majority of the DCs had internalised more IgtB already after lh of incubation compared to the WT bacteria or the galE mutant Hardly any intemalisation was seen for the LPS-deficient mutant. In addition to high level of intemalisation, surface adherence remained typically high for the IgtB mutant bacteria throughout the time course. These results confirm the results by FACS; increased association of bacteria with DCs results in increased intemalisation of bacteria.
3. Example: Activation and maturation of DCs in response to Neisseria
meninsitidis mutant strains
In order to study the relationship between intemalisation of the bacteria and cytokine production, IL12 and TNF-a produced by DCs in response to the WT and the mutants were measured intracellular and simultaneous analysis for intemalisation was performed (Figure 3). DCs were co-cultured with FITC-labelled bacteria at a ratio of 1:50 for 18 hours and then stained for intracellular production of TNF-a and IL12. The quadrants were placed to separate cells that had associated with FITC bacteria from cells that had no FITC bacteria attached. The percentages given are the percentage of DCs producing (upper right quadrant) or not producing (lower right quadrant)

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intracellular cytokines after internalisation of bacteria. The WT, IgtB and galE mutant were all potent inducers of TNF-a and IL-12 production by DCs whereas the LPS-deficient mutant was not. Virtually all of the DCs that had internalised N. meningitidis WT, the IgtB and galE mutant were producing high levels of TNF-a. In the case of IL-12, production was found for approximately 50% of the DCs that had internalised the FITC-labelled bacteria.
In addition to the intracellular cytokine measurements, we also measured the secreted cytokine levels by DCs in response to N. meningitidis (Figure 4). DCs were co-cultured with the mutant and WT bacteria at 1:200 ratio for 18h and the supernatants collected for analysis of secreted IL12, IL10, TNF-a, IL6 and IL-lß. The results are shown as the percentage of cytokine production compared to the WT (WT=100%). Both the IgtB and galE mutant induced somewhat less IL12, TNF-a and IL-lß as compared to the WT bacteria. IL-10 and IL-6 production of both IgtB and galE appears to be similar to the WT strain. Hardly any cytokine production was observed for the LPS-deficient strain.
Finally, maturation of DCs stimulated with WT and mutant bacteria was studied by measuring expression of the costimulatory molecules CD40 and CD86 (Figure 5). Expression of CD40 and in particular CD86 was higher when DCs where stimulated with the IgtB mutant as compared to DCs stimulated with WT or galE mutant bacteria. Hardly any expression of CD40 and CD86 was found when DCs where stimulated with the lpxA mutant.
In conclusion, these data demonstrate that binding and intemalisation of the IgtB mutant by DCs results in activation and maturation of DCs comparable to the level of DC activation and maturation induced with WT bacteria.
4. Example: Identification of the receptor mediating binding and intemalisation of
the IgtB mutant
The enhanced binding and uptake by DCs of the IgtB mutant prompted us to investigate whether this binding and internalisation is mediated via a specific DC receptor. Therefore we analysed the capability of the WT and the mutants to bind C-type lectin receptors which are capable of recognizing oligosaccharides and are highly expressed on immature DCs. Binding of a panel of C-type-lectin-Fc chimeras to whole
cells of WT and mutant bacteria was studied in an soluble adhesion assay (Figure 6).

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WO 2005/107798 PCT/NL2005/000358
Whereas the WT, the galE mutant and the LPS-deficient mutant did not bind any of the C-type-lectin Fc-chimeras, strong binding of DC-SIGN-Fc was found for the IgtB mutant. Binding of the IgtB mutant to DC-SIGN was also found in HEK293T cells

transiently transfected with DC-SIGN or K562 cells stably expressing DC-SIGN (data not shown). Moreover, the specifity of IgtB LPS for DC-SIGN was demonstrated by studying DC phagocytosis of the IgtB mutant in the presence or absence of the anti-DC-SIGN blocking antibody AZN-D1 (Figure 7). In the presence of AZN-D1, phagocytosis of IgtB by DCs was reduced to the level of binding observed for the WT clearly demonstrating that DC-SIGN binds and internalises the IgtB mutant.
5. Example: Targeting of the IgtB mutant to DC-SIGN initiates a THl immune
response
To assess the functional relevance, if any, of the interaction of IgtB mutant LPS with DC-SIGN, we studied DC-driven T cell responses after pulsing immature DC with either PFA-fixed wild type or IgtB mutant bacteria. No differences, were found in maturation of DCs pulsed with wild type or IgtB mutant bacteria as assessed by expression of co-stimulatory molecules and maturation markers (Fig. 8a). However, marked differences were observed in the THl/TH2-profiIes induced with these strains (Fig. 8b). DC pulsed with N. meningitidis wild type predominantly generated a TH2
type immune response as the majority of T cells were producing IL-4. DC pulsed with

the IgtB mutant predominantly evoked IFN-?-producing T cells, thus shifting the THI-
versus TH2-cell balance towards THI. This shift in TH1/TH2 balance was observed in 3 independent donors. These data indicate that specific targeting of IgtB LPS towards DC-SIGN generates DC signals that drive the immune response into THI, which is a highly desirable phenomenon for adjuvants. See also P. Moingeon et al. (2001) Vaccine 19:4363-4372.
6. Example: Binding and internalisation of oligosaccharide/lipid A double mutant
strains of Neisseria meningitidis bv DCs
A flow cytometric technique was used to investigate binding and internalisation of WT N. meningitidis, the lgtA and IgtB oligosaccharide mutants and their lpxLl double mutants, and the LPS-deficient mutant by human DCs. Immature DCs were co-cultured with FITC-labelled mutant strains derived from the WT N. meningitidis
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WO 2005/107798 PCT/NL2005/000358
H44/76 at a DC/bacteria ratio of 1:100 and analysed by FACS for the presence of DC associated FITC-labelled bacteria (Figure 9). The IgtB single mutant showed consistently higher DC association than the WT or the IgtA single mutant, hi addition, also in the lpxLl mutant background the IgtB mutation resulted in higher association than either wildtype or IgtA oligosaccharide structures, indicating that the increased IgtB-mediated binding to DC-SIGN is also possible with LPS containing penta-acylated IpxLl lipid A.
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WO 2005/107798
1. Use of a Neisserial LOS in the manufacture of a medicar
a mammal, whereby the Neisserial LOS is represented by the f
KDC • 2•4= GlcNAc •1•3 Gal •1•4 Glc •1•4 Hep •l•S KDC
• 1•3
Hep•PEA (3
• 1•2
GlcNAc ,
whereby LA is a wild-type Lipid A moiety or a Lipid A moiet
2. A use according to claim 1, whereby the Neisserial LOS
3. A use according to claims 1 or 2, whereby the Ne
combination with an antigen in the manufacture of a medicam-
response against the antigen in the mammal.
4. A use according to claim 3, whereby the antigen is
bacterium, a virus, a fungus, a parasite, a cancer cell or an alle
5. A use according to any one of claims 1-4, whereby L
which the toxicity is less than 80% of the toxicity of a wite
determined in a WEHI assay.
6. A use according to any one of claims 1-5, whereby the
from the group consisting of:

(a) a lipid A moiety as obtainable from a Neisseria strain wi
the activity or inactivates a lpxLl or lpxL2 gene or a home
(b) a lipid A moiety as obtainable by removal of one or
esterified fatty acids of a wild-type Lipid A moiet
acyloxyhydrolase;
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WO 2005/107798 PCT/NL2005/000358
1. Use of a Neisserial LOS in the manufacture of a medicament for immunisation of
a mammal, whereby the Neisserial LOS is represented by the formula (I);
KDO • 2•4 GlcNAc •1•3 Gal •1•4 Glc •1•4 Hep •1•5 KDO - LA
• 1•3
Hep•PEA (3 or 6)
• 1•2
GlcNAc ,
whereby LA is a wild-type Lipid A moiety or a Lipid A moiety with reduced toxicity.
2. A use according to claim 1, whereby the Neisserial LOS is used as an adjuvant.
3. A use according to claims 1 or 2, whereby the Neisserial LOS is used in
combination with an antigen in the manufacture of a medicament for raising an immune
response against the antigen in the mammal.
4. A use according to claim 3, whereby the antigen is from or produced by a
bacterium, a virus, a fungus, a parasite, a cancer cell or an allergen.

5. A use according to any one of claims 1 - 4, whereby LA is a Lipid A moiety of
which the toxicity is less than 80% of the toxicity of a wild-type Lipid A moiety, as
determined in a WEHI assay.
6. A use according to any one of claims 1 - 5, whereby the lipid A moiety is selected
from the group consisting of:

(a) a lipid A moiety as obtainable from a Neisseria strain with a mutation that reduces
the activity or inactivates a lpxLl or lpxL2 gene or a homologue thereof;
(b) a lipid A moiety as obtainable by removal of one or more secondary O-linked
esterified fatty acids of a wild-type Lipid A moiety by treatment with an
acyloxyhydrolase;
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WO 2005/107798 PCT/NL2005/0003S8
(c) a lipid A moiety as obtainable by hydrazine treatment of a wild-type Lipid A
moiety;
(d) a lipid A moiety as obtainable by dephosphorylation with an alkaline phosphatase.
7. A use according to any one of claims 1 - 6, whereby the lipid A moiety is selected
from the group consisting of:
(a) a lipid A moiety with a secondary C12-acyl only on the reducing glucosaraine;
(b) a lipid A moiety with a secondary C12-acyl only on the non-reducing glucosaminc;
(c) a lipid A moiety lacking both secondary C12-acyl groups;
(d) a lipid A moiety lacking one or more phosphate groups from either the 1 or 4'
position; and,
(e) a lipid A moiety with a combination of the deacylations in (a), (b) or (c) and the
dephosphorylations in (d).
8. A Neisseria! LOS represented by the formula (I):
EDO • 2•4 GlcNAc •1•3 Gal •1•4 Glc •1•4 Hep •1•5 KDO - LA
• 1•3
Hep•PEA (3 or 6)
• 1•2
GlcNAc ,
whereby LA is a Lipid A moiety with reduced toxicity.
9. A Neisserial LOS according to claim 8, whereby the toxicity of the Lipid A
moiety is less than 80% of the toxicity of a wild-type Lipid A moiety, as determined in
a WEHI assay.
10. A Neisserial LOS according to claims 8 or 9, whereby the lipid A moiety is
selected from the group consisting of:
(a) a lipid A moiety as obtainable from a Neisseria strain with a mutation that reduces the activity or inactivates a lpxLl or lpxL2 gene or a homologue thereof;
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WO 2005/107798 PCT/NL2005/000358
(b) a lipid A moiety as obtainable by removal of one or more secondary O-linked
esterified fatty acids of a wild-type Lipid A moiety by treatment with an
acyl oxyhydrol ase;
(c) a lipid A moiety as obtainable by hydrazine treatment of a wild-type Lipid A
moiety;
(d) a lipid A moiety as obtainable by dephosphorylation with an alkaline pbosphatase.
11. A Neisserial LOS according to any one of claims 8-10, whereby the lipid A
moiety is:
(a) a lipid A moiety with a secondary C12-acyl only on the reducing glucoaamine;
(b) a lipid A moiety with a secondary C12-acyl only on the non-reducing glucosamine;
(c) a lipid A moiety lacking both secondary C12-acyl groups;
(d) a lipid A moiety lacking one or more phosphate groups from either the 1 or 4'
position; and,
(e) a lipid A moiety with a combination of the deacylations in (a), (b) or (c) and the
dephosphorylations in (d).

12. A composition comprising a Neisserial LOS as defined in any one of claims 8 -
11 and a pharmaceutically acceptable carrier.
13. A composition according to claim 12, the composition further comprising an
antigen is from or produced by a bacterium, a virus, a fungus, a parasite, a cancer cell

or an allergen.
14. A method for producing a Neisserial LOS as defined in any one of claims 8-11,
the method comprising the steps of:
a) culturing a N. menigitidis strain, whereby the strain expresses a Neisserial LOS of
unmunotype 1,2, L3 or L4 and lacks an active IgtB gene, or expresses a Neisserial LOS
of immunotype L6, and whereby the strain carries a mutation that inactivates or reduces
the expression of one or more of the ipxLl or lpxL2 gene or a homologue thereof; and,
b) recovery of the Neisserial LOS.
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WO 2005/107798 PCT/NL2005/00O358

15. A method for producing a Neisserial LOS as defined in any one of claims 8-11, the method comprising the steps of:
a) culturing a N. menigitidis strain, whereby the strain expresses a Neisserial LOS of
immunotype L2, L3 or L4 and lacks an active igtB gene, or expresses a Neisserial LOS
of immunotype L6; .
b) recovery of the Neisserial LOS; and,
c) treating the Neisserial LOS with at least one of hydrazine, an alkaline phosphatase or
acyloxyhydrolase to reduce the toxicity of the lipid A moiety.
16. A method according to claim 15, whereby in step c) the toxicity is reduced until less than 80% of the toxicity of the wild-type Neisserial LOS, as determined in a WEHI assay.
17. Use of a Neisserial LOS in the manufacture of a medicament for immunisation of a mammal and a Neisserial LOS represented by the formula (I) substantially as herein described with reference to foregoing examples and accompanying drawings.

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The present invention relates to Neisserial Lipo-Ohgo-Saccharides (LOS) that comprise a tri-saccharide outer core that shows increased binding to the DC-SIGN receptor on dendritic cells, as a result of which the Neisserial LOS's of the invention have increased immunostimulatory activity. The tri-saccharide outer core of the Neiserial LOS's combined with a Lipid A moiety with reduced toxicity is useful as an adjuvant in vaccine preparations.


Documents:

03610-kolnp-2006 abstract.pdf

03610-kolnp-2006 claims.pdf

03610-kolnp-2006 correspondence others.pdf

03610-kolnp-2006 description(complete).pdf

03610-kolnp-2006 drawings.pdf

03610-kolnp-2006 form-1.pdf

03610-kolnp-2006 form-2.pdf

03610-kolnp-2006 form-3.pdf

03610-kolnp-2006 form-5.pdf

03610-kolnp-2006 international publication.pdf

03610-kolnp-2006 international search authority report.pdf

03610-kolnp-2006 others.pdf

03610-kolnp-2006 priority document.pdf

3610-KOLNP-2006-ABSTRACT 1.1.pdf

3610-KOLNP-2006-ABSTRACT 1.2.pdf

3610-KOLNP-2006-AMANDED PAGES OF SPECIFICATION.pdf

3610-KOLNP-2006-CLAIMS 1.2.pdf

3610-KOLNP-2006-CLAIMS.pdf

3610-KOLNP-2006-CORRESPONDENCE 1.1.pdf

3610-KOLNP-2006-CORRESPONDENCE 1.2.pdf

3610-KOLNP-2006-CORRESPONDENCE 1.3.pdf

3610-KOLNP-2006-CORRESPONDENCE-1.2.pdf

3610-KOLNP-2006-DESCRIPTION (COMPLETE) 1.1.pdf

3610-KOLNP-2006-DESCRIPTION (COMPLETE) 1.2.pdf

3610-KOLNP-2006-DRAWINGS 1.1.pdf

3610-KOLNP-2006-EXAMINATION REPORT REPLY RECIEVED.pdf

3610-KOLNP-2006-FORM 1 1.1.pdf

3610-KOLNP-2006-FORM 1 1.2.pdf

3610-KOLNP-2006-FORM 2 1.1.pdf

3610-KOLNP-2006-FORM 2 1.2.pdf

3610-KOLNP-2006-FORM 3 1.1.pdf

3610-KOLNP-2006-FORM-27.pdf

3610-KOLNP-2006-OTHERS 1.1.pdf

3610-KOLNP-2006-OTHERS 1.2.pdf

3610-KOLNP-2006-PA 1.1.pdf

3610-KOLNP-2006-PA 1.2.pdf

3610-KOLNP-2006-PA-1.1.pdf

3610-KOLNP-2006-PA.pdf

3610-KOLNP-2006-PETITION UNDER RULE 137.pdf


Patent Number 247039
Indian Patent Application Number 3610/KOLNP/2006
PG Journal Number 13/2011
Publication Date 01-Apr-2011
Grant Date 25-Mar-2011
Date of Filing 04-Dec-2006
Name of Patentee DE STAAT DER NEDERLANDEN ,VERT.DOOR DE MINISTER VAN VWS
Applicant Address P.O.Box 20350,NL-2500 EJ Den Haag,
Inventors:
# Inventor's Name Inventor's Address
1 STEEGHS, Liana,Juliana Koldijksterraklaan 190,NL-3544 PP Utrecht,
2 VAN DERLEY,Peter,Andre Veeartsenijstraat 211,NL-3572 DJ Utrecht,
3 VAN DE WINKEL,Johannes,Gerardus,Joseph Verlengde Stoklaan 80,NL-3707 CK Zeist,
PCT International Classification Number A61K 39/39
PCT International Application Number PCT/NL2005/000358
PCT International Filing date 2005-05-11
PCT Conventions:
# PCT Application Number Date of Convention Priority Country
1 04076401.1 2004-05-11 EUROPEAN UNION