Title of Invention

A NOVEL PROCESS FOR THE PREPARATION OF THERMOLABILE CAFFEINE FRACTION FROM THE TEA PLANT LEAVES

Abstract The present invention relates to a thermolabile caffeine fraction useful for an efficient Agrobacterium -mediated genetic transformation in plant systems to develop desired traits in plant, and a method of preparing said fraction from tea leaves and also, an efficient and cost-effective method of introducing said Agrobacterium-mediated genetic transformation into plant systems using said caffeine fraction of tea leaves.
Full Text THERMOLABILE CAFFEINE FRACTION OF TEA LEAVES AND AN
EFFICIENT METHOD OF INTRODUCING AGROBACTERIUMMEDIATED
GENETIC TRANSFORMATION IN PLANTS
Field of the present invention
The present invention relates to a thermolabile caffeine fraction useful for an
efficient Agrobacterium -mediated genetic transformation in plant systems to
develop desired traits in plant, and a method of preparing said fraction from tea
leaves and also, an efficient and cost-effective method of introducing said
Agrobacterium-mediated genetic transformation into plant systems using said
caffeine fraction of tea leaves.
Background and prior art references of present invention
Agrobacterium is a gram negative soil bacterium that transfers its Ti plasmid or the
Tumor inducing plasmid1 into the cells of most dicotyledonous plants and quite a good
number of monocotyledonous plants. The Ti plasmid undergoes cell-cell recognition,
signal transduction, cellular and nuclear import and finally T-DNA integration (Winans
SC Two-way chemical signaling in Agrobacterium-plant interactions Microbiological-
Reviews. 1992,56: 1,12-31).
The transfer DNA or the T-DNA harbouring the oncogenes bounded by the 25bp
imperfect border repeats on either side brings about genetic transformation and hence
crown gall disease. The process of signal transduction is initiated by a set of several
Virulence genes', of which 7 genes are the most important.
The first step of signal reception and then transduction is triggered by the inducers like
phenolics and sugars (Ankenbauer RG; Nester EW Sugar-mediated induction of
Agrobacterium tumefaciens virulence genes: structural specificity and activities of
monosaccharides. Journal of Bacteriology. 1990, 172: 11,6442-6446).
For the past two decades, revolutionary work has been done on development of
genetically transformed plants wherein, the disarmed strains of Agrobacterium (i. e. the
Ti plasmid with the oncogenes replaced by penes of interest) are employed to produce
plants as per ones requirements at a much t .. ner time. The inducers that are used for
such genetic transformation experiments are generally the Acetosyringone (Morris JW;
Morris RO Identification of an Agrobacterium tumefaciens virulence gene inducer from
the Pinaceous gymnosperm Pseudotsuga menziesii. Proceedings of the National
Academy of Sciences of the United States of America. 1990, 87: 9, 3614-3618) and the
Hydroxy-acetosyringone that are commercially provided by the Sigma Aldrich
Company, USA.
Tea leaves when extracted, are known to have fractions of caffeine, catechins and other
flavonols and amino acids. Some chance experiments indicated that particular fractions
of tea containing caffeine are capable of promoting infection by Agrobacterium, cellcell
recognition and virulence. This led us to believe that the caffeine fractions can be
used as a virulence inducer during genetic transformation experiments instead of
Acetosyringone or Hydroxy-acetosyringone.
Besides containing high levels of the 6 types of catechins (C) and their derivatives viz.,
epicatechin (EC), gallocatechins (GC), epigallocatechins (EGC), epicatechin gallate
(ECg), epigallocatechin gallate (EGCg), tea leaves also contain caffeine, amino acids,
nitrogenous compounds, vitamins, inorganic elements, carbohydrates and lipids (Chu
DC and Juneja L.R. General chemical composition of green tea and its infusion. In:
Chemistry and Application of Green Tea. 1997. CRC Press, N. York. eds. Yamamoto
T., Juneja L.R., Chu DC, Kim M., pp.).
The report of Sunilkumar et a/., 1999. (Sunilkumar G; Vijayachandra K; Veluthambi K.
1999, Pre-incubation of cut tobacco leaf explants promotes Agrobacterium-mediated
transformation by increasing vir gene induction. Plant Science Limerick. 141: 1, 51-58)
indicated that the requirement of preincubation for increased transformation efficiency
can be obviated by the addition of 100 uM acetosyringone to the freshly cut leaf rings
during the co-cultivation with Agrobacterium. The production of vir gene inducers by
the leaf rings during the pre-incubation period is an important factor that contributes to
increased transformation efficiency of Agrobacterium upon pre-incubation but the
drawback is that the effect of the inducer 'acetosyringone1 and pre-incubation is similar
and thus inducers do not have much role to play.
Expression of Agrobacterium tumefaciens virulence (vir) genes and transformation of
dicots'by this organism are dependent upon host plant phenolic compounds and several
alkylsyringamides, syringic acid, synthetic amides like ethylsyringamide, ferulic or
sinapic acids are powerful inducers of vir genes (Vir gene inducing activities of
hydroxycinnamic acid amides in Agrobacterium tumefaciens Berthelot, K; Buret, D;
Guerin, B; Delay, D; Negrel, J; Delmotte, FM. Phytochemistry. 1998, 49: 6, 1537-
1548).
However, none of the inducers tested exhibited higher activity than acetosyringone, the
reference compound for vir gene induction, with the exception to ethylsyringamide at
concentrations above 1 mM. When tested on A. tumefaciens strain A348 (pSM243cd),
ethylferulamide and ethylsinapamide are more efficient than the corresponding
phenolic acids but only above 100
The major draw back is that the above mentioned inducers are very expensive chemical
compounds that are required to be used at high concentrations above 100 j^M.
Moreover, the compounds like acetosyringone are manufactured only by a few select
companies like Sigma Aldrich and requires import from United States of America by
research laboratories situated in developing countries.
Lee et al, 1995 (Lee, YongWoog; Jin, ShouGuang; Sim, WoongSeop; Nester, EW;
Lee, YW; Jin, SG; Sim, WS Proceedings of the National Academy of Sciences of the
United States of America. 1995 Genetic evidence for direct sensing of phenolic
compounds by the VirA protein of Agrobacterium tumefaciens. 92: 26, 12245-12249.)
reported that the virulence (vir) genes of Agrobacterium tumefaciens are induced by
low-molecular-weight phenolic compounds and monosaccharides through a twocomponent
regulatory system consisting of the VirA and VirG proteins. The virinducing
abilities of 15 different phenolic compounds like acetovanillone was tested
using four wild-type strains of A. tumefaciens KU12, C58, A6, and Bo542. By
transferring different Ti plasmids into isogenic chromosomal backgrounds, the
phenolic-sensing determinant was shown to be associated with Ti plasmid. Subcloning
of Ti plasmid indicates that the vira locus determines which phenolic compounds can
function as vir gene inducers. These results suggest that the VirA protein directly
senses the phenolic compounds for vir gene activation. The drawback of this report is
that subcloning of Ti plasmid is required for the identification of the accurate phenolics
inducer for vir a locus.
Hess et al., 1991 (Hess, KM; Dudley, MW; Lynn, DG; Joerger, RD; Binns, AN. 1991,
Mechanism of phenolic activation of Agrobacterium virulence genes: development of a
specific inhibitor of bacterial sensor/response systems. Proceedings of the National
Academy of Sciences of the United States of America. 1991, 88: 17, 7854-7858)
reported that the aglycone of the dihydrodiconiferyl alcohol glycosides were potent
inducers of virulence gene expression in A. tumefaciens. Using this model, a specific
inhibitor of vir induction was developed. The drawback of this report is that this
inhibitor did not affect the induction of other genes on the Ti plasmid but irreversibly
blocks vir expression.
Fortin et al., 1992 (Fortin, C; Nester, EW; Dion, P. 1992, Growth inhibition and loss of
virulence in cultures of Agrobacterium tumefaciens treated with acetosyringone.
Journal of Bacteriology. 174: 17, 5676-5685) reported that acetosyringone, a phenolic
inducer of the virulence (vir) genes of A. tumefaciens, inhibited the growth of the
nopaline type strains T37 and C58 incubated under acidic conditions. Two other vir
inducers, sinapinic acid and syringaldehyde, also inhibited growth and promoted
accumulation of avirulent clones in cultures of strains C58F and T37. On the other
hand, various acetosyringone analogues reported not to induce the vir genes did not act
as growth inhibitors. Mutants of strain C58F lacked the capacity to induce a virB::/acZ
fusion in the presence of acetosyringone. The drawback of this report is that while
some inducers were promotive, others are inhibitory and are also strain specific.
Delmotte et al., 1991 (Delmotte FM; Delay D; Cizeau J; Guerin B; Leple JC
1991 .Agrobacterium vir-inducing activities of glycosylated acetosyringone,
acetovanillone, syringaldehyde and syringic acid derivatives. Phytochemistry., 30: 11,
3549-3552.) reported that when A. tumefaciens str. A348 (pSM358) harbouring a
virE::lacZ fusion plasmid was used to detect the ability of 13 synthetic acetosyringone,
acetovanillone, syringaldehyde and syringic acid beta-glycosides to induce virulence,
the activity of the reporter beta-galactosidase was detected by spectrofluorimetry using
4-methylumbelliferyl beta-galactopyranoside as substrate. Acetosyringonyl beta-Lfticopyranoside
was the most active monoglycoside tested; even at high concentrations
this compound was devoid of toxic effects. However, monoglycosides were less active
vir inducers than free acetosyringone. In contrast, the beta-maltoside of syringaldehyde
showed higher activity than the free phenol at high concentrations. The activity of such
glycosylated inducers may be related to specific sugar receptors on the bacterial cell
surface. The drawback of the report is that the acetosyringone is costly compound that
need to be imported from Sigma Aldrich, USA.
Objects of the present invention
The main object of the present invention is to develop a thermolabile caffeine fraction
useful for Agrobacterium -mediated genetic transformation in plant.
Another main object of the present invention is to develop a thermolabile caffeine
fraction from tea leaves.
Yet another object of the present invention is to characterize the thermolabile caffeine
fraction obtained from tea leaves.
Still another object of the present invention is to develop a fraction from tea leaves with
an ability to induce strain non-specific Agrobacterium -mediated genetic
transformation in plant
Still another object of the present invention is to develop a natural and effective inducer
for Agrobacterium -mediated genetic transformation in plant.
Still another object of the present invention is to develop an economical and costeffective
inducer for Agrobacterium -mediated genetic transformation in plant.
Still another object of the present inventio: ;. to determine the ideal concentration
range of the chloroform fraction of tea leaf for Agrobacterium -mediated genetic
transformation in plant.
Further, another object of the present invention is to develop a method of preparing a
thermolabile caffeine fraction from tea leaves.
Another main object of the present invention is to develop a method to method of
preparing chloroform fraction from the tea leaf extract having the property of inducing
Agrobacterium -mediated genetic transformation in plant.
Further, another object of the present invention is to develop an efficient method for
introducing said Agrobacterium-mediated genetic transformation into plant.
Another object of the present invention is to develop an efficient method for
introducing said Agrobacterium-mediated genetic transformation into plant using said
caffeine fraction of tea leaves.
Yet another object of the present invention is to develop a cost-effective method of
introducing said Agrobacterium-mediated genetic transformation into plant.
Still another object of the present invention is to develop a method for introducing said
Agrobacterium-mediated genetic transformation into plant using naturally occurring
source.
Still another object of the present invention is to develop a substitute for the cost of the
transformation inducers like acetosyringone and hydroxy-acetosyringone.
Further, another object of the present invention is to develop a method for introducing
genes of desired traits in plants by Agrobacterium-mediated genetic transformation into
plant using said caffeine fraction of tea leaves.
Further, another object of the present invention is to compare the transformation
inducing capability of both autoclaved and' filter sterilized caffeine fractions. '
Summary of the present invention
The present invention relates to a thermolabile caffeine fraction useful for an efficient
Agrobacterium -mediated genetic transformation in plant systems to develop desired
traits in plant, and a method of preparing said fraction from tea leaves and also, an
efficient and cost-effective method of introducing said Agrobacterium-mediated genetic
transformation into plant systems using said caffeine fraction of tea leaves.
Detailed description of the present invention
Accordingly, the present invention relates to a thermolabile caffeine fraction useful for
an efficient Agrobacterium -mediated genetic transformation in plant systems to
develop desired traits in plant, and a method of preparing said fraction from tea leaves
and also, an efficient and cost-effective method of introducing said Agrobacteriummediated
genetic transformation into plant systems using said caffeine fraction of tea
leaves.
In an embodiment of the present invention, wherein a cost-effective and efficient
method of using thermolabile caffeine fraction of tea leaves as a natural inducer for
bacteria Agrobacterium tumefaciens mediated genetic transformations in plants to
produce desired traits in the plants, said method comprising step of:
• inoculating strains of the bacteria into liquid modified Yeast Mannitol Broth,
• incubating the inoculum for about 12-16 hrs at about 25-30°C, at about 150-200
rpm in dark,
• harvesting the incubated inoculum at about 0.6-0.8 optical density at 600 nm for
lX109cells/ml during log phase of bacterial growth to obtain pellet,
• suspending the pellet in fresh Yeast Mannitol Broth without damaging the
bacterial cells to obtain a suspension,
• immersing explants of different plants in bacterial suspension for about 5-35
minutes,
• incubating explants on incubation medium for different periods of 1-10 days,
• using caffeine fraction at concentrations of about 0.5-300(j.g/ml in fresh cultures
of the bacteria to induce vir genes, thereby transferring Ti plasmid harbouring
the transgene into the plant for genetically transforming the plants with genes of
desired traits.
In another embodiment of the present invention, wherein pelleting of living bacterial
cells by centrifugation at 15-30 minutes at 4000-8000 rpm and 25-30°C.
In yet another embodiment of the present invention, wherein caffeine fraction is better
inducer as compared to commercially available inducers.
In still another embodiment of the present invention, wherein a method of preparing
thermolabile caffeine fraction from the tea plant, said method comprising steps of:
• extracting dried tea leaves overnight at room temperature with about 10-40%
aqueous acetone,
• filtrating tea leaves extract with n-hexane to obtain aqueous and lipid layers,
• extracting the aqueous layer with petroleum ether and ethyl acetate to remove
catechins from the aqueous layer,
• extracting aqueous layer of step (c) with chloroform to obtain chloroform layer,
• estimating total caffeine fraction concentration in the chloroform layer,
• sterilizing caffeine fraction both by autoclaving and filter sterilization to obtain
said fraction.
In still another embodiment of the present invention, wherein a thermolabile caffeine
fraction.
In another embodiment of the present invention, a thermolabile caffeine fraction of tea
leaves- a substitute for acetosyringone for Agrobacterium mediated genetic
transformations which comprises step of:
(i) inoculation of two strains of Agrobacterium tumefaciens viz. EHA105 (mild)
and GV2260 (virulent) harbouring the antibiotic resistance genes for kanamycin
or hygromycin and the reporter gus gene from mother cultures of respective
strains into 10-30 ml liquid modified Yeast Mannitol Broth with kanamycin or
hygromycin,
(ii) incubation for 12-16 hrs at 25-30°C and 150-200 rpm in dark,
(iii) harvesting at 0.6-0.8 optical density at 600 nm for lX109cells/ml during log
phase of bacterial growth,
(iv) pelleting of living bacterial cells by centrifugation at 15-30 minutes at 4000-
8000 rpm and 25-30°C,
(v) suspension of bacterial pellet in fresh 5-25ml of Yeast Mannitol Broth without
damaging the bacterial cells,
(vi) optimization of bacterial cell density at lX109cells/ml by measuring optical
density at 600 nm,
(vii) immersion of various explants of different plants in bacterial suspension for 5-
35 minutes,
i
(viii) blotting of explants on filter papers to remove excess Agrobacterium
tumefaciens,
(ix) incubation of explants on incubation medium for different periods of 1 -10 days,
(x) 100-500g fresh tea leaves of Kangra jat dried in an oven at 60°C to a constant
weight,
(xi) dried leaves extracted overnight at room temperature with 0.4-1.2 litres of 10-
40% aqueous acetone and filtered,
(xii) the filterate extracted with 100-500 ml of n-hexane to obtain two layers for
removal of lipids,
(xiii) the aqueous layer taken and extracted with petroleum ether (100-300ml) and
ethyl acetate (100-400 ml) to remove catechins,
(xiv) aqueous layer taken and extracted with chloroform (100-400 ml) and ammonia
solution (3-10%),
(xv) chloroform layer concentrated to 10-50 ml and total caffeine estimated,
(xvi) concentrated chloroform layer serves as a caffeine fraction,
(xvii) sterilization of caffeine fraction both by autoclaving and filter sterilization
(xviii) use of caffeine fraction at concentrations of 0.5-300(o.g/ml in fresh cultures of
Agrobacterium tumefaciens instead of acetosyringone.
(xix) transfer of various explants of different plants to regeneration medium
containing different concentrations of 0.5-300fig/ml caffeine fractions for
inducing the vir genes and increasing the transformation efficiency.
(xx) transfer of Agrobacterium tumefaciens free explants to regeneration medium
containing selection antibiotics for further regeneration and transgenic plant
development, and
Brief description of the accompanying drawing
Figure 1 shows effect of filter sterilized and autoclaved caffeine tea fraction on the
growth of Agrobacterium tumefaciens culture.
Figure 2 shows comparison of filter sterilized and autoclaved caffeine fractions.
Figure 3 shows effect of different fractions of tea extract on the growth of
Agrobacterium tumefaciens culture.
Figure 4 shows comparison of the effect of acetosyringone and the caffeine fraction
on the growth of Agrobacterium tumefaciens.
(xxi) comparative analysis of the caffeine fraction (both autoclave and filter
sterilized- please refer figures 1 and 2) and catechin fraction and the crude tea
extract though HPLC using acetonitrile and phosphoric acid in gradient mode
(0.05 to 0.2%) for detection of virulence inducing compound using diode array
detector at 250 to 280 nm wavelength as shown in Table 1 and 2 here below.

In still another embodiment of the present invention, genetic transformation in plants
via Agrobacterium is brought about by induction of virulence or vir genes and transfer(Table Removed)
of the Ti plasmid harbouring the transgene into the plant tissue. Transgenes that code
for desirable traits like disease and stress resistance, crop quality, flavors, colors, better
shelf life when introduced into the plant tissues can bring about crop improvement in a
shorter time than conventional breeding. Generally phenolic inducers are responsible
for the induction of the vir genes and the popular commercially available inducers are
the acetosyringone or the hydroxy-acetosyringone. These commercially available
inducers are not only expensive but are also confined to few select companies like
Sigma Aldrich, USA.
In still another embodiment of the present invention, caffeine fraction of tea leaves has
the potential for substituting these commercially available inducers as they can induce
the vir genes and bring about genetic transformation. This natural fraction that is easily
available is not only cost effective but can also improve the transformation efficiency.
In another embodiment of the present invention, the virulence inducer caffeine
fraction from tea leaves can be used for transgenic production using different explants
of different plant species.
In still another embodiment of the present invention, different concentrations of filter
sterilized caffeine fractions of tea leaves were added as above.
In still another embodiment of the present invention, different concentrations of
autoclaved caffeine fractions of tea leaves were added as above.
In still another embodiment of the present invention, Clostridium perfringens, a
foodborne pathogen, exerts its toxic effect on humans when producing a toxin during
sporulation in the intestine. Investigations were undertaken to determine the effect of
caffeine which is consumed in large amounts worldwide in the diet, on sporulation and
subsequent toxin formation. In the presence of 100 ug caffeine/ml or 200 ug
theobromine/ml, sporulation of C. perfringens NCTC 8679 rose from Enterotoxin concentration increased from undetectable levels to 450 ug/mg of cell
extract protein. Heat-resistant spore levels increased from and 2 X 107/ml. Caffeine caused a 3- to 4-fold increase in the percentages of cells
possessing retractile spores and a similar increase in enterotoxin concentration.
In still another embodiment of the present invention, the study on mechanism by which
caffeine stimulates sporulation of C. perfringens indicated that cultures exposed to
caffeine had significantly elevated levels of intracellular adenosine and guanosine
triphosphates (Nolan LL; Labbe RG; Craker LE (ed.); Nolan L (ed.); Shetty K Effect of
plant alkaloids on the sporulation of a food-borne pathogen. International symposium
on medicinal and aromatic plants, Amherst, Massachusetts, USA, 27-30 Aug. 1995.
Acta-Horticulturae. 1996, No. 426, 287-295).This property led us to employ the
caffeine fraction from tea leaves for inducing of virulence genes in Agrobacterium
mediated genetic transformations and also a substitute of an expensive chemical
acetosyringone. Moreover, since the the virulence inducer caffeine fraction from tea
leaves are also obtained from the maintenance foliage leaves that are generally
discarded and burnt, this method appears to be all the more economical and cost
effective. Use of the virulence inducer caffeine fraction from tea leaves is specially
important in increasing the transformation efficiency.
In still another embodiment of the present invention, a thermolabile caffeine
fraction of tea leaves - a substitute of acetosyringone for Agrobacterium mediated
genetic transformations, (see figure 4)
In still another embodiment of the present invention, a thermolabile caffeine fraction of
tea leaves- a substitute for acetosyringone for Agrobacterium mediated genetic
transformations obviates the drawbacks as detailed above.
In still another embodiment of the present invention, the novelty of this method is that a
cost effective natural extract was identified that could substitute for the cost of the
inducers like acetosyringone and hydroxy-acetosyringone.
In still another embodiment of the present invention, the caffeine fraction of tea
leaves can be used for Agrobacterium tumefaciens mediated genetic transformation of
different systems or plants or explants.
In still another embodiment of the present invention, an economical system for
obtaining an inducer without involving any costly extraction methods wherein the
crude leaf extract with bactericidal activity is also extracted without requiring
expensive instruments.
In still another embodiment of the present invention, the caffeine fraction of tea leaf
with virulence inducer activity can be obtained in abundance from naturally growing
tea bushes.
In still another embodiment of the present invention, the virulence inducer caffeine
fraction from tea leaves is of natural origin and is not of synthetic or semi-synthetic
nature.
In still another embodiment of the present invention, the virulence inducer caffeine
fraction from tea leaves can be obtained in abundance from actively growing apical
shoots i. e. two and a bud making it economical.
In still another embodiment of the present invention, the virulence inducer caffeine
fraction from tea leaves can be obtained in abundance even from the lower
maintenance foliage thereby making it more economical as generally such leaves are
discarded or burnt.
In still another embodiment of the present invention, the crude extract can also be
used during 'hairy root production' using Agrobacterium rhizogenesis.
In still another embodiment of the present invention, the transformation efficiency by
Agrobacterium can be increased considerably.
In still another embodiment of the present invention, use of tea leaf extract for
Agrobacterium tumefaciens genetic transformation in different systems or plants or
explants wherein the generally used synthetic inducers are ineffective.
In still another embodiment of the present invention, deriving a cost effective system
for Agrobacterium tumefaciens genetic transformation wherein no commercial and
yet costly inducers are used.
The crude tea leaf extract in patent no NF 14/02 was obtained by using acetone and nhexane
where as the caffeine fraction in patent no NF 221/02 was obtained by using
solvent extraction using ethyl acetate and petroleum benzene for removal of
catechins. The crude tea leaf extract contained generally catechin and caffeine
whereas the caffeine fraction had only caffeine, therefore they should not be treated
as one. The supporting data in figure 3 represents: Effect of different fractions of tea
extract on the growth of Agrobacterium tumefaciens culture. This clearly
substantiates the difference between both the fractions.
Use of caffeine fraction at concentrations of 0.5-300u,g/ml in the medium of fresh
cultures of Agrobacterium tumefaciens instead of acetosyringone. This refers to the
concentration of caffeine in the culture medium and actually refers to concentrations
ranging from 0.5-300(ag of caffeine in the medium. The concentration of the inducer is
indirectly estimated as the concentration of caffeine in the fraction.
The following examples are given by way of illustration and therefore should not
be construed to limit the scope of the present invention.
Example 1
Two strains of Agrobacterium tumefaciens viz. EHA105 (mild) and GV2260 (virulent)
harbouring the antibiotic resistance genes for kanamycin or hygromycin and the
reporter gus gene from mother cultures of respective strains were inoculated into 10-30
ml liquid modified Yeast Mannitol Broth with kanamycin or hygromycin and incubated
for 12-16 hrs at 25-30°C and 150-200 rpm in dark. Cells were harvested at 0.6-0.8
optical density at 600 nm for lX109cells/ml during log phase of bacterial growth.
Living bacterial cells were pelleted of by centrifugation at 15-30 minutes at 4000-8000
rpm and 25-30°C. Bacterial pellet was suspended in fresh 5-25ml of Yeast Mannitol
Broth without damaging the bacterial cells and cell density was optimized at
lX109cells/ml by measuring optical density at 600 nm. Various explants of different
plants were immersed in bacterial suspension for 5-35 minutes. Explants were blotted
on filter papers to remove excess Agrobacterium tumefaciensis. Explants incubated on
incubation medium for different periods of 1-10 days. Fresh tea leaves (100-500g) of
Kangra jat dried in an oven at 60°C to a constant weight and extracted overnight at
room temperature with 0.4-1.2 litres of 10-40% aqueous acetone and filtered. The
filtrate extracted with 100-500 ml of n-hexane to obtain two layers for removing lipids.
The aqueous layer was extracted with petroleum ether (100-300ml) and ethyl acetate
(100-400 ml) to remove catechins. The aqueous layer was taken and extracted with
chloroform (100-400 ml) and ammonia solution (3-10%). The chloroform layer was
concentrated to 10-50 ml and total caffeine was estimated. The concentrated
chloroform layer served as a caffeine fraction and was sterilized both by autoclaving
and filter sterilization method. The concentrated chloroform layer served as a caffeine
fraction which was used at concentrations of 0.5-300|ig/ml in fresh cultures of
Agrobacterium tumefaciens. Various explants of different plants were transferred to
regeneration medium containing different concentrations of 0.5-300(^g/ml caffeine
fractions for inducing the vir genes and increasing the transformation efficiency.
Agrobacterium tumefaciens free explants were transferred to regeneration medium
containing selection antibiotics for further regeneration and transgenic plant
development. Comparative analysis of the three fractions viz. the caffeine fraction
(both autoclave and filter sterilized), the catechin fraction and the crude tea extract
though HPLC. Acetonitrile and phosphoric acid (0.05 to 0.2%) were used in gradient
mode for detection of 'virulence inducing compound' with the help of diode array
detector at 250 to 280 nm wavelength.
Example 2
Caffeine fractions were filter sterilized and used as an inducing agent instead of
acetosyringone in different explants for Agrobacterium tumefaciens mediated
transformations as described above in Example-1.
Example 3
Caffeine fractions were autoclaved used as an inducing agent instead of
acetosyringone in different explants for Agrobacterium tumefaciens mediated
transformations as described above in Example-1 and 2.
The main advantages of the present invention are:
(1) Caffeine fraction of tea leaf can be used as a potent virulence inducing agent for
Agrobacterium tumefaciens mediated genetic transformations instead of
acetosyringone.
(2) Caffeine fraction of tea leaf can be used for Agrobacterium tumefaciens mediated
genetic transformation in different systems or plants or explants wherein the
commercially used virulence inducing agent acetosyringone is ineffective.
(3) Since no commercial virulence inducer need to be used, caffeine fraction of tea
leaf prove to be a cost effective system for Agrobacterium tumefaciens mediated
genetic transformation.
(4) Since the caffeine fraction of tea leaf with virulence acitivity is obtained without
involving any expensive instruments or costly extraction methods, its use proves to
be an economical method.
(5) The caffeine fraction of tea leaf with virulence inducing ability can be easily
obtained in abundance from naturally growing tea bushes round the year.
(6) The caffeine fraction of tea leaf with virulence inducing ability is of natural origin
and is not of synthetic or semi-synthetic nature.
(7) The caffeine fraction of tea leaf with virulence inducing ability can be obtained in
abundance from even the lower maintenance foliage thereby, making it more
economical as generally such leaves are discarded or burnt.
(8) The caffeine fraction of tea leaf can also be used as an agent with virulence
inducing ability in different in vitro systems involving different plants or explants.
(9) The caffeine fraction of tea leaf with virulence inducing ability can also be used
during 'hairy root production' using Agrobacterium rhizogenesis.
(10) The caffeine fraction of tea leaf with virulence inducing ability can be used to
increase the efficiency of Agrobacterium mediated transformation.



Claims
1. A cost-effective and efficient method of using thermolabile caffeine fraction of tea
leaves as a natural inducer for bacteria Agrobacterium tumefaciens mediated genetic
transformations in plants to produce desired traits in the plants, said method comprising
step of:
a. inoculating strains of the bacteria into liquid modified Yeast Mannitol Broth,
b. incubating the inoculum for about 12-16 hrs at about 25-30°C, at about 150-200
rpm in dark,
c. harvesting the incubated inoculum at about 0.6-0.8 optical density at 600 nm for
lX109cells/ml during log phase of bacterial growth to obtain pellet,
d. suspending the pellet in fresh Yeast Mannitol Broth without damaging the
bacterial cells to obtain a suspension,
e. immersing explants of different plants in bacterial suspension for about 5-35
minutes,
f. incubating explants on incubation medium for different periods of 1-10 days,
g. using caffeine fraction at concentrations of about 0.5-300ig/ml in fresh cultures
of the bacteria to induce vir genes, thereby transferring Ti plasmid harbouring
the transgene into the plant for genetically transforming the plants with genes of
desired traits.
2. A method as claimed in claim 1, wherein pelleting of living bacterial cells by
centrifugation at 15-30 minutes at 4000-8000 rpm and 25-30°C.
3. A method as claimed in claim 1, wherein caffeine fraction is better inducer as
compared to commercially available inducers.
18
4. A method of preparing thermolabile caffeine fraction from the tea plant, said
method comprising steps of:
a. extracting dried tea leaves overnight at room temperature with about
10-40% aqueous acetone,
b. filtrating tea leaves extract with n-hexane to obtain aqueous and lipid
layers,
c. extracting the aqueous layer with petroleum ether and ethyl acetate to
remove catechins from the aqueous layer,
d. extracting aqueous layer of step (c) with chloroform to obtain
chloroform layer,
e. estimating total caffeine fraction concentration in the chloroform
layer,
f. sterilizing caffeine fraction both by autoclaving and filter sterilization
to obtain said fraction.
5. A cost-effective and efficient method of using thermolabile caffeine
fraction of tea leaves as a natural inducer for bacteria Agrobacterium
tumefaciens mediated genetic transformations in plants to produce
desired traits in the plants substabtially as herein described with
reference to examples.

Documents:

371-DEL-2003-Abstract-(17-03-2008).pdf

371-DEL-2003-Abstract-07-04-2008.pdf

371-del-2003-abstract-16-04-2008.pdf

371-del-2003-abstract.pdf

371-DEL-2003-Claims-(17-03-2008).pdf

371-DEL-2003-Claims-07-04-2008.pdf

371-del-2003-claims-16-04-2008.pdf

371-del-2003-claims.pdf

371-DEL-2003-Correspondence-Others-(17-03-2008).pdf

371-DEL-2003-Correspondence-Others-(23-03-2010).pdf

371-DEL-2003-Correspondence-Others-07-04-2008.pdf

371-del-2003-correspondence-others-16-04-2008.pdf

371-del-2003-correspondence-others.pdf

371-del-2003-correspondence-po.pdf

371-DEL-2003-Description (Complete)-(17-03-2008).pdf

371-del-2003-description (complete).pdf

371-DEL-2003-Description (Complete)07-04-2008.pdf

371-del-2003-description (complete)16-04-2008.pdf

371-del-2003-drawings.pdf

371-DEL-2003-Form-1-(17-03-2008).pdf

371-DEL-2003-Form-1-07-04-2008.pdf

371-del-2003-form-1.pdf

371-del-2003-form-18.pdf

371-DEL-2003-Form-2(17-03-2008).pdf

371-DEL-2003-Form-2-07-04-2008.pdf

371-del-2003-form-2-16-04-2008.pdf

371-del-2003-form-2.pdf

371-DEL-2003-Form-3-(17-03-2008).pdf

371-DEL-2003-Form-3-(23-03-2010).pdf

371-del-2003-form-3.pdf

371-DEL-2003-Petition-138-(17-03-2008).pdf


Patent Number 219443
Indian Patent Application Number 371/DEL/2003
PG Journal Number 25/2008
Publication Date 20-Jun-2008
Grant Date 06-May-2008
Date of Filing 25-Mar-2003
Name of Patentee COUNCIL OF SCIENTIFIC AND INDUSTRIAL RESEARCH,
Applicant Address RAFI MARG, NEW DELHI-110 001, INDIA.
Inventors:
# Inventor's Name Inventor's Address
1 INDRA SANDAL
2 AJAY KUMAR
3 ASHU GULATI
4 AMITA BHATTACHARYA
5 PARAMVIR SINGH AHUJA
6 RAVINDRANATH, SRIGIRIPURAM DESIKACHAR
PCT International Classification Number C12N 15/00
PCT International Application Number N/A
PCT International Filing date
PCT Conventions:
# PCT Application Number Date of Convention Priority Country
1 NA