Title of Invention

"N-{2-TERT-BUTYL-1-[(4,4-DIFLUOROCYCLOHEXYL)METHYL]-1H-BENZIMIDAZOL-5-YL}ETHANESULFONAMIDE"

Abstract Compounds of Formula I, or pharmaceutically acceptable salts thereof: (chemical formula to be inserted here. please see paper copy) I wherein R1, R2, R3, R4, R5, and G arc as defined in the specificalion as well as salts and pharmaceutical compositions including the compounds are prepared. They are useful in therapy, in particular in the management of pain.
Full Text Benzimidazole derivatives, compositions containing
them, preparation thereof and uses thereof I
BACKGROUND OF THE INVENTION
1. Field of the invention
The invention is related to therapeutic compounds, pharmaceutical
compositions containing these compounds, manufacturing processes thereof and uses
thereof. Particularly, the present invention is related to compounds that may be
effective in treating pain, cancer, multiple sclerosis, Parkinson's disease, Huntington's
chorea, Alzheimer's disease, anxiety disorders, gastrointestinal disorders and/or
cardiovascular disorders.
2. Discussion of Relevant Technology
Pain management has been studied for many years. It is known that
cannabinoid receptor (e.g., CBi receptor, CB2 receptor) ligands including agonists,
antagonists and inverse agonists produce relief of pain in a variety of animal models
by interacting with CBi and/or CBa receptors. Generally, CBi receptors are located
predominately in the central nervous system, whereas CBj receptors are located
primarily in the periphery and are primarily restricted to the ceils and tissues derived
from the immune system.
While CBi receptor agonists, such as A9-tetrahydrocannabinol (A9-THC) and
anadamide, are useful in anti-nociception models in animals, they tend to exert
undesired CNS side-effects, e.g., psychoactive side effects, the abuse potential, drug
dependence and tolerance, etc. These undesired side effects are known to be
mediated by the CBi receptors located in CNS. There are lines of evidence, however,
suggesting that CBj agonists acting at peripheral sites or with limited CNS exposure
can manage pain in humans or animals with much improved overall in vivo profile.
Therefore, there is a need for new CBi receptor ligands such as agonists that
may be useful in managing pain or treating other related symptoms or diseases with
reduced or minimal undesirable CNS side-effects.
DESCRIPTION OF THE EMBODIMENTS
The present invention provides CBi receptor ligands which may be useful in
treating pain and/or other related symptoms or diseases.
The term "Cm-n" or "Cm.n group" used alone or as a prefix, refers to any group
having m to n carbon atoms.
The term "alky!" used alone or as a suffix or prefix, refers to a saturated
monovalent straight or branched chain hydrocarbon radical comprising 1 to about 12
carbon atoms. Illustrative examples of alkyls include, but are not limited to, Ci^alky
groups, such as methyl, ethyl, propyl, isopropyl, 2-methyl-l-propyl, 2-methyl-2-
propyl, butyl, isobutyl, t-butyL
The term "cycloalkyl," used alone or as suffix or prefix, refers to a saturated
monovalent ring-containing hydrocarbon radical comprising at least 3 up to about 12
carbon atoms. Examples of cycloalkyls include, but are not limited to, C3_7cycloalkyl
groups, such as cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, and cycloheptyl,
and saturated cyclic andbicyclic terpenes. A cycloalkyl can be unsubstituted or
substituted by one or two suitable substituents. Preierably, the cycloalkyl is a
monocyclic ring or bicyclic ring.
The term "alkoxy" used alone or as a suffix or prefix, refers to radicals of the
general formula -O-R, wherein R is an alkyl. Exemplary alkoxy includes methoxy,
ethoxy, propoxy, isopropoxy, butoxy, t-butoxy, and isobutoxy.
Halogen includes fluorine, chlorine, bromine and iodine.
"RT" or "rt" means room temperature.
In one aspect, an embodiment of the invention provides a compound of
Formula I, a pharmaceutically acceptable salt thereof, diastereomers, enantiomers, or
mixtures thereof:
wherein
G is selected from -0-, -CHF- and -CF2-;
R1 is selected from Q-ealkyl and C3,6cycloalkyl;
R2 is selected from -H and methyl; and
R3, R4 and R5 are independently selected from fluoro and methyl.
In another embodiment, the compounds may be those of formula I, wherein
G is selected from -0- and -CFa-;
R1 is selected from Chalky! and Cs-ecycloalkyl;
R2 is selected from -H and methyl; and
R3, R4 and R5 are independently selected from fluoro and methyl.
Another embodiment of the invention provides a compound of formula I,
wherein
G is selected from-O- and -CFa-;
R3 is selected from Chalky! and Ca^cycloalkyl;
R2 selected from -H and methyl; and
R3, R4 and R5 are independently selected from fluoro and methyl.. .
A further embodiment of the invention provides a compound of formula I,
wherein
R1 is selected from ethyl, propyl and cyclopropyl;
A R selected from -H and methyl; and
3 R4 and R5 are independently selected from fluoro and methyl with R3, R4
and R5 being the same.
An even further embodiment of the invention provides a compound of formula
wherein
R1 is selected from ethyl, propyl and cyclopropyl;
R2 selected from -H and methyl; and
R3, R4 and R5 are independently selected from fluoro and methyl with R3, R4
and R5 being the same.
An even further embodiment of the invention provides a compound of formula
wherein
Gis-CHF-;
R1 is selected from ethyl, propyl, t-butyl and cyclopropyl;
R2 selected from-H and methyl; and
R3, R4 and R5 are independently selected from fhioro and methyl with R3., R4
and R3 being the same.
In another embodiment, R1 of formula I is selected from ethyl, propyl, t-butyl
and cyclopropyl.
In another embodiment, G of formula I is -CHF- or -CFa-.
In another embodiment, R3, R4 and R5 of formula I are selected from fluoro
and methyl with R3, R4 and R5 being the same.
In another embodiment, the compound of the invention may be selected from N-[2-
tert-Buryl-l-(tetrahydro-2H-pyranylmethyl)-lH-ben2irnidazol-5--yl]-Nmernylcyclopropanesulfonarnide;
N-[2-te^Butyl-l-(tetrahydro-2H-pyran-4-ylmethyl)-lH-benzimidazol-5-yl]-Nmethylpropane-
1 -sulfonamide;
#-[2- Butyl-l-(tetiahy
methylbutane-1 -sulfonamide;
N- {2-tert-Butyl-l -[(4,4-difluorocyclohexyl)methyl]- l.ff-benzirmdazol-S-yl} -Nmethylbutane-
1 -sulfonamide;
benzimidazol-5-yl]propane-l-sxilfonamide;
7V-me%l-Ar-[l-(te1xahydro-2/f-pyran-4-ylme%l)-2-(trifluorome%l)-l
benzimidazol-5-yl]cyclopropanesulfonamide;
[2-feButyl-l-(tetrahydro-2//-pyran-4-ylmethyl)-lH-benzimidazol-5-yl]-A'-
methylpentane- 1 -sulfonamide;
Ar-[2-teBuryl-l-(tetrahydro-2B-pyran-4-yhnethyl)-l^-ben2drnidaz
methylethanesulfonamide;
N-[2-te7?-Butyl-l-(tetrahydro-2#-py
dimethylpropane-2-sulfonamide;
Ar-{2-te/^Buiyl-l-[(4,4-difluorocyclohexyl)memyl]-lir-benzimidazol-5-yl}--Armethylpropane-
1 -sulfonamide;
Ar-{2-ferButyl-l-[(4,4-difiuorocyclohexyl)methyl]-l/f-benzimidazol-5-yl}-JV:-
methylethanesulfonamide;
7V-{2-terr-Butyl-l-[(4,4-difluorocycIohexyl)metliyl]-l//'-beiiziniidazol-5-yl}propane-
1-sulfonamide;
N- {2-tert-Butyl-1 - [(4,4-difhiorocy clohexy l)methyl] - l#-benzimidazol-5-
yl} methanesulfonamide;
Ar-{2-to-Butyl-l-[(4,4-difluorocyclohexyl)methyl]-lJff-ben2imida2ol-5-
yl} ethanesulfonamide;
7V-{2-te7t-Butyl-l-[(4,4-difluorocyclohexyl)methyl]-l/r-beiizimidazol-5-
yl} cyclopropanesulfonamide;
Ar-{2-/t-Butyl-l-[(4,4-difluorocyclohexyl)methyl]-lH'-beiizimidazol-5-yl}-JVmethylcyclopropanesulfonamide;
Ar-{2-fert-Butyl-l-[(434-difluorocyclohexyl)methyl]-lJf/'-benzimidazol-5-yl}-2-
methylpropane-2-suIfonamide;
JVr-[l-[(4/-Difluorocyclohexyl)methyl]-2-(l,l-difluoroetI:yl)-llf-benziinidazol-5--
yljcyclopropanesulfonamide;
A^-[l-[(4,4-Difluorocyclo3aexyl)mefliyl]-2-(l,l-difluoroethyl)-l^-benzimidazol-5-
yl]ethanesulfona3nide;
A^-[l-[(4,4-Difluorocyclob.exyl)methyl]-2-(14-difluoroethyl)-l/f-benziinidazol-5-yI]-
2-methylpropane-2-sulfonamide;
JV-[2-(l ,1 -difluoroethyl)-! -(tetTahydro-2/f-pyran-4-ylmethyl)-l/f-benzIniidazol-5-yl3-
7V-methylethanesuIfonamide;
7V-[2-(l ,1 -difluoroethyl)-! -(tetxahydro-2^-pyran-4-ylmetiiyl)-lJ?:f-beriz;imidazol-5--
JV-methylpropane-1 -sulfonamide;
N-[2-(l ,1 -difluoroethyl)-! "(tetraliydro-2J:f-pyran-4-ylmethyl)-l^"-ben2iniidazol-5-yl]-
A^-methylcyclopropanesulfonamide;
Ar-{2-?e;t-Butyl-l-[(4-fluorocyclohexyl)metliyl]-l^f-beri2iEQidazol-5-
yl} ethanesulfonamide;
7/-{2-/er^Butyl-l-[(4-fluorocyclohexyI)methyl]-l^benzimidazol-5-
yl} cyclopropanesulfonamide;
N- (2-te;Y~Butyl-1 -[(4-fluorocycIohexyl)mefIiyl]-1/f-benzimidazol-S-yl) -2-
methylpropane-2-sulfonamide;
and pharmaceutically acceptable salts thereof.
A further embodiment of the invention provides a compound selected from
and phannaceutically acceptable salts thereof.
It will be understood that when compounds of the present invention contain
one or more chiral centers, the compounds of the invention may exist in, and be
isolated as, enantiomeric or diastereomeric forms, or as a racemic mixture. The
present invention includes any possible enantiomers, diastereomers, racernates or
mixtures thereof, of a compound of Formula I. The optically active forms of the
compound of the invention may be prepared, for example, by chiral chromatographic
separation of a racemate, by synthesis from optically active starting materials or by
asymmetric synthesis based on the procedures described thereafter.
It will also be appreciated that certain compounds of the present invention may
exist as geometrical isomers, for example E and Z isomers of alkenes. The present
invention includes any geometrical isomer of a compound of Formula I. It will
further be understood that the present invention encompasses tautomers of the
compounds of the Formula I.
It will also be understood that certain compounds of the present invention may
exist in solvated, for example hydrated, as well as unsolvated forms. It will further be
understood that the present invention encompasses all such solvated forms of the
compounds of the Formula I.
Within the scope of the invention are also salts of the compounds of the
Formula I. Generally, pharmaceutically acceptable salts of compounds of the present
invention may be obtained using standard procedures well known in the art, for
example by reacting a sufficiently basic compound, for example an alkyl amine with a
suitable acid, for example, HC1 or acetic acid, to afford a physiologically acceptable
anion. It may also be possible to make a corresponding alkali metal (such as sodium,
potassium, or lithium) or an alkaline earth metal (such as a calcium) salt by treating a
compound of the present invention having a suitably acidic proton, such as a
carboxylic acid or a phenol with one equivalent of an alkali metal or alkaline earth
metal hydroxide or alkoxide (such as the ethoxide or methoxide), or a suitably basic
organic amine (such as choline or meglumine) in an aqueous medium, followed by
conventional purification techniques.
In one embodiment, the compound of Formula I above may be converted to a
pharmaceutically acceptable salt or solvate thereof, particularly, an acid addition salt
such as a hydrochloride, hydrobromide, phosphate, acetate, fumarate, maleate,
tartrate, citrate, methanesulphonate or p-toluenesulphonate.
We have now found that the compounds of the invention have activity as
Pharmaceuticals, in particular as modulators or ligands such as agonists, partial
agonists, inverse agonist or antagonists of CBi receptors. More particularly, the
compounds of the invention exhibit selective activity as agonist of the CB] receptors
and are useful in therapy, especially for relief of various pain conditions such as
chronic pain, neuropathic pain, acute pain, cancer pain, pain caused by rheumatoid
arthritis, migraine, visceral pain etc. This list should however not be interpreted as
exhaustive. Additionally, compounds of the present invention are useful in other
disease states in which dysfunction of CBj receptors is present or implicated.
Furthermore, the compounds of the invention may be used to treat cancer, multiple
sclerosis, Parkinson's disease, Huntington's chorea, Alzheimer's disease, anxiety
disorders, gastrointestinal disorders and cardiovascular disorders.
Compounds of the invention are useful as immunomodulators, especially for
autoimmune diseases, such as arthritis, for skin grafts, organ transplants and similar
surgical needs, for collagen diseases, various allergies, for use as anti-tumour agents
and anti viral agents.
Compounds of the invention are useful in disease states where degeneration or
dysfunction of cannabinoid receptors is present or implicated in that paradigm. This
may involve the use of isotopically labelled versions of the compounds of the
invention in diagnostic techniques and imaging applications such as positron emission
tomography (PET).
Compounds of the invention are useful for the treatment of diarrhoea,
depression, anxiety and stress-related disorders such as post-traumatic stress
disorders, panic disorder, generalized anxiety disorder, social phobia, and obsessive
compulsive disorder, urinary incontinence, premature ejaculation, various mental
illnesses, cough, lung oedema, various gastro-intestinal disorders, e.g. constipation,
functional gastrointestinal disorders such as Irritable Bowel Syndrome and Functional
Dyspepsia, Parkinson's disease and other motor disorders, traumatic brain injury,
stroke, cardioprotection following miocardial infarction, spinal injury and drug
addiction, including the treatment of alcohol, nicotine, opioid and other drug abuse
and for disorders of the sympathetic nervous system for example hypertension.
Compounds of the invention are useful as an analgesic agent for use during
general anaesthesia and monitored anaesthesia care. Combinations of agents with
different properties are often used to achieve a balance of effects needed to maintain
the anaesthetic state (e.g. amnesia, analgesia, muscle relaxation and sedation).
Included in this combination are inhaled anaesthetics, hypnotics, anxiolytics,
neuromuscular blockers and opioids.
Also within the scope of the invention is the use of any of the compounds
according to the Formula I above, for the manufacture of a medicament for the
treatment of any of the conditions discussed above.
A further aspect of the invention is a method for the treatment of a subject
suffering from any of the conditions discussed above, whereby an effective amount of
a compound according to the Formula I above, is administered to a patient in need of
such treatment.
Thus, the invention provides a compound of Formula I or pharmaceutically
acceptable salt or solvate thereof, as hereinbefore defined for use in therapy.
In a further aspect, the present invention provides the use of a compound of
Formula I or a pharmaceutically acceptable salt or solvate thereof, as hereinbefore
defined in the manufacture of a medicament for use in therapy.
In the context of the present specification, the term "therapy" also includes
"prophylaxis" unless there are specific indications to the contrary. The term
"therapeutic" and "therapeutically" should be contrued accordingly. The term
"therapy" within the context of the present invention further encompasses to
administer an effective amount of a compound of the present invention, to mitigate
either a pre-existing disease state, acute or chronic, or a recurring condition. This
definition also encompasses prophylactic therapies for prevention of recurring
conditions and continued therapy for chronic disorders.
The compounds of the present invention are useful in therapy, especially for
the therapy of various pain conditions including, but not limited to: acute pain,
chronic pain, neuropathic pain, back pain, cancer pain, and visceral pain.
In use for therapy in a warm-blooded animal such as a human, the compound
of the invention may be administered in the form of a conventional pharmaceutical
composition by any route including orally, intramuscularly, subcutaneously, topically,
intranasally, intraperitoneally, intrathoracially, intravenously, epidurally,
intrathecally, transdermally, intracerebroventricularly and by injection into the joints.
In one embodiment of the invention, the route of administration maybe oral,
intravenous or intramuscular.
The dosage will depend on the route of administration, the severity of the
disease, age and weight of the patient and other factors normally considered by the
attending physician, when determining the individual regimen and dosage level at the
most appropriate for a particular patient.
For preparing pharmaceutical compositions from the compounds of this
invention, inert, phannaceutically acceptable carriers can be either solid and liquid.
Solid form preparations include powders, tablets, dispersible granules, capsules,
cachets, and suppositories.
A solid carrier can be one or more substances, which may also act as diluents,
flavoring agents, solubilizers, lubricants, suspending agents, binders, or table
disintegrating agents; it can also be an encapsulating material.
In powders, the carrier is a finely divided solid, which is in a mixture with the
finely divided compound of the invention, or the active component. In tablets, the
active component is mixed with the carrier having the necessary binding properties in
suitable proportions and compacted in the shape and size desired.
For preparing suppository compositions, a low-melting wax such as a mixture
of fatty acid glycerides and cocoa butter is first melted and the active ingredient is
dispersed therein by, for example, stirring. The molten homogeneous mixture in then
poured into convenient sized moulds and allowed to cool and solidity.
Suitable earners are magnesium carbonate, magnesium stearate, talc, lactose,
sugar, pectin, dextrin, starch, tragacanth, methyl cellulose, sodium carboxymethyl
cellulose, a low-melting wax, cocoa butter, and the like.
The term composition is also intended to include the formulation of the active
component with encapsulating material as a carrier providing a capsule in which the
active component (with or without other carriers) is surrounded by a carrier which is
thus in association with it. Similarly, cachets are included.
Tablets, powders, cachets, and capsules can be used as solid dosage forms
suitable for oral administration.
Liquid form compositions include solutions, suspensions, and emulsions. For
example, sterile water or water propylene glycol solutions of the active compounds
may be liquid preparations suitable for parenteral administration. Liquid
compositions can also be formulated in solution in aqueous polyethylene glycol
solution.
Aqueous solutions for oral administration can be prepared by dissolving the
active component in water and adding suitable colorants, flavoring agents, stabilizers,
and thickening agents as desired. Aqueous suspensions for oral use can be made by
dispersing the finely divided active component in water together with a viscous
material such as natural synthetic gums, resins, methyl cellulose, sodium
carboxymethyl cellulose, and other suspending agents known to the pharmaceutical
formulation art.
Depending on the mode of administration, the pharmaceutical composition
will preferably include from 0.05% to 99%w (per cent by weight), more preferably
from 0.10 to 50%w, of the compound of the invention, all percentages by weight
being based on total composition.
A therapeutically effective amount for the practice of the present invention
may be determined, by the use of known criteria including the age, weight and
response of the individual patient, and interpreted within the context of the disease
which is being treated or which is being prevented, by one of ordinary skills in the art.
Within the scope of the invention is the use of any compound of Formula I as
defined above for the manufacture of a medicament.
Also within the scope of the invention is the use of any compound of Formula
I for the manufacture of a medicament for the therapy of pain.
Additionally provided is the use of any compound according to Formula I for
the manufacture of a medicament for the therapy of various pain conditions including,
but not limited to: acute pain, chronic pain, neuropathic pain, back pain, cancer pain,
and visceral pain.
A further aspect of the invention is a method for therapy of a subject suffering
from any of the conditions discussed above, whereby an effective amount of a
compound according to the Formula I above, is administered to a patient in need of
such therapy.
Additionally, there is provided a pharmaceutical composition comprising a
compound of Formula I or a pharmaceutically acceptable salt thereof, in association
with a pharmaceutically acceptable carrier.
Particularly, there is provided a pharmaceutical composition comprising a
compound of Formula I or a pharmaceutically acceptable salt thereof, in association
with a pharmaceutically acceptable carrier for therapy, more particularly for therapy
of pain.
Further, there is provided a pharmaceutical composition comprising a
compound of Formula I or a pharmaceutically acceptable salt thereof, in association
with a pharmaceutically acceptable carrier use in any of the conditions discussed
above.
In a further aspect, the present invention provides a method of preparing the
compounds of the present invention.
In one embodiment, the invention provides a process for preparing a
compound of Formula I, comprising:
reacting a compound of Formula II with a compound of formula III,
wherein R1, R2, R3, R4, R5 and G are as defined above.
Compounds of the present invention may also be prepared according to the
synthetic routes as depicted in Schemes 1,2 and 3.
Human CBj receptor from Receptor Biology (hCBi) or human CBa receptor
from BioSignal (hCB2) membranes are thawed at 37 °C, passed 3 times through a 25-
gauge blunt-end needle, diluted in the cannabinoid binding buffer (50 mM Tris, 2.5
mM EDTA, 5 mM MgCl2, and 0.5 mg/mL BSA fatty acid free, pH 7.4) and aliquots
containing the appropriate amount of protein are distributed in 96-well plates. The
ICso of the compounds of the invention at hCBi and hCBz are evaluated from 10-point
dose-response curves done with 3H-CP55,940 at 20000 to 25000 dpm per well (0.17-
0.21 nM) in a final volume of 300 ul. The total and non-specific binding are
detennined in the absence and presence of 0.2 jiM of HU210 respectively. The plates
are vortexed and incubated for 60 minutes at room temperature, filtered through
Unifilters GF/B (presoaked in 0.1% polyethyleneimine) with the Tomtec or Packard
harvester using 3 mL of wash buffer (50 mM Tris, 5 mM MgCl2) 0.5 mg BSA pH
7.0). The filters are dried for 1 hour at 55 °C. The radioactivity (cpm) is counted in a
TopCount (Packard) after adding 65 }j.l/well of MS -20 scintillation liquid.
and hCB? GTPyS binding

9Human CBi receptor from Receptor Biology (hCBi) or human CBa receptor
membranes (BioSignal) are thawed at 37 °C, passed 3 times through a 25-gauge
blunt-end needle and diluted in the GTPyS binding buffer (50 mM Hepes, 20 mM
NaOH, 100 mM NaCl, 1 mM EDTA, 5 mM MgCl2, pH 7.4, 0.1% BSA). The EC50
and Eaax of the compounds of the invention are evaluated from 10-point doseresponse
curves done in SOOul with the appropriate amount of membrane protein and
100000-130000 dpm of GTPg35S per well (0.11 -0.14 nM). The basal and maximal
stimulated binding is determined in absence and presence of 1 uM (hCBi) or 10 uM
(hCBj) Win 55,212-2 respectively. The membranes are pre-incubated for 5 minutes
with 56.25 jiM (hCB2) or 112.5 uM (hCBi) GDP prior to distribution in plates (15
uM (hCB2) or 30 uM (hCBj) GDP final). The plates are vortexed and incubated for
60 minutes at room temperature, filtered on Unifilters GF/B (presoaked in water) with
the Tomtec or Packard harvester using 3 ml of wash buffer (50 mM Tris, 5 mM
MgCl2,50 mM NaCl, pH 7.0). The filters are dried for 1 hour at 55 °C. The
radioactivity (cpm) is counted in a TopCount (Packard) after adding 65 ul/well of
MS-20 scintillation liquid. Antagonist reversal studies are done in the same way
except that (a) an agonist dose-response curve is done in the presence of a constant
concentration of antagonist, or (b) an antagonist dose-response curve is done in the
presence of a constant concentration of agonist.
Based on the above assays, the dissociation constant (Ki) for a particular
compound of the invention towards a particular receptor is determined using the
following equation:
Ki = IC50/(l+[rad]/Kd),
Wherein ICso is the concentration of the compound of the invention at which
50% displacement has been observed;
[rad] is a standard or reference radioactive ligand concentration at that
moment; and
Kd is the dissociation constant of the radioactive ligand towards the particular
receptor.
Using the above-mentioned assays, the Ki towards human CBi receptors for
certain compounds of the invention are in the range of between 3 nM and 195 nM.
ECso for these compounds are in the range of between 2.3 nM and 300 nM. Emax for
these compounds are in the range of between 109 % and 144 %.
Assay Condition for Measuring Solubility
A 30 mM DMSO stock is prepared of the sample and then a 25 uL aliquot is
added to a 96-well plate and genevac at 40 °C for 4 hours. To the genevac compound
add 250 uL of sodium phosphate buffer (pH 7.4) and then mix at 1200 rpm for 24 h
using an Eppendorf Thermomixer at 25°C. After mixing solution is transferred to a
96-well Whatman GF/B filter plate and then filtered under vacuum. 'The supernatant
is men injected onto the LC/MS for analysis and quantitation is performed using a 1-
point calibration for the compound of interest.
Metabolic Stability Assays in Rat and Human Liver Microsomes
A solution of 500 ul of 100 uM compound in DMSO is incubated with human
or rat liver microsomes (843ul of rnicrosomes of 0.5618 mg/mL in 30ml 0.1 M
KH2PO4 buffer pH7.4) at 37°C for 10 min in a 96-deep well plate. NADPH (46 uL)
at a concentration of 8.33 mg/ml in 100 mM KHaPCU buffer pH 7.4 is added to start
the reaction. The reaction mixtures are transferred to a 384-well plate containing
acetonitrile to quench the reaction at time 0,1Q, 20,30 minutes. The 384 well plate is
centrifuged for 30 min at 9000g, at 4°C, from which samples are analyzed by LOMS
(model: XDB Eclipse CIS). Three references are analyzed by LC/MS as a positive
control. Data are processed following a standard procedure. The metabolic stability
of assayed compounds is expressed as uL/min/mg
In addition, metabolic stabilities (hClint and rClint) and sociabilities (aqueous)
of selected compounds of the invention are determined using one or more assays
described above. It is found that the selected compounds have improved metabolic
stabilities and/or soluabilities in water. The metabolic stabilities and soluabilities for
these selected compounds are illustrated in Table 1 below.
N-[24ert-Butyl-l-(tetrahydro-2H-pyran-4-ylmethyl)-lH-berizhiudazol--5--yl]-Nmethylcyclopropanesulfonamide
Step A: N-[2-tert-Butyl-1 -(tetrahydro-2H-pyran-4-yknethyl)-1 H-benzimidazol-5-yl]-
N-methylcyclopropanesulfonamide
2-terf-Butyl-N-methyl-1 -(tetrahydro-2H-pyran-4-ylmethyl)-1 H-benzimidazol-5-
amine (for preparation, see following steps B to F) (50 nag, 0.166 mmol) and a
catalytic amount of DMAP were dissolved in 5 mL of DCM. Cyclopropanesulfonyl
chloride (30 mg, 0.216 mmol) was added dropwise and the solution was stirred at rt
overnight The solution was washed with saturated aqueous NaHCOs solution, brine
and dried over anhydrous MgSO4- The product was purified by reversed-phase HPLC
using 10-70% CH3CN/H2O and lyophilized affording the title compound as the
corresponding TFA salt Yield: 56 mg (65%). :H NMR (400 MHz, METHANOLD4)
5 0.90 - 0.94 (m, 2 H), 0.97 -1.02 (m, 2 H), 1.53 -1.59 (m, 2 H), 1.59 - 1.65 (m, 2
H), 1.69 (s, 9 H), 2.36 - 2.42 (m, 1 H), 2.60 - 2.65 (m, 1 H), 3.36 (m, 2 H), 3.43 (s, 3
H), 3.94 (d, 7=3.58 Hz, 1 H), 3.96 (d, J=3.07 Hz, 1 H), 4.55 (d, 7=7.68 Hz, 2 H), 7.74
(dd, 7=8.96,2.05 Hz, 1 H), 7.81 (d, 7=1.54 Hz, 1 H), 7.98 (d, 7=8.96 Hz, 1 H); MS
(ESI) (M+H)+406.0.
Step B: Methyl (4-fluoro-3-nitrophenyl)carbamate
H2N NO,
Methyl chloroformate (13.2 mL, 170.2 mmol) was added dropwise to a cold (0°C)
dichloromethane (200 mL) solution of 4-fiuoro-3-nitro aniline (24.15 g, 154.7 mmol)
and DIPEA (35 mL, 201 mmol). The reaction mixture was stirred at rt overnight.
The solution was then diluted with 200 mL of dichloromethane and washed with 2M
HCI, brine and dried over anhydrous MgS04. The solvent was concentrated and the
product was directly used for the next step without further purification. Yield: 35.5 g
(99%). 'HNMR (400 MHz, CHLOROFORM-D) 5 3.81 (s, 3H), 7.02 (s, 1H), 7.23
(m, 1H), 7.72 (d, 7= 8.59Hz, 1H), 8.17 (dd, 7= 6.35,2.64Hz, 1H).
Step C: Methyl {3-nitro-4-[(tetrahydro-2H-pyran-4-
ylmethyl)amino]phenyl}carbamate
Methyl (4-fluoro-3-nitrophenyl)carbainate (2.0g, 9.32 rnmol) and 4-aminomethyl
tetrahydropyran (1.28g, 11.2 mmol) were stirred in 50 mL of EtOH containing TEA
(2.0 mL, 14.0 mmol) at 75°C for48h. The solvent was evaporated. The residue was
dissolved in EtOAc and washed with aqueous 5% KHSCU, saturated aqueous
NaHCOs solution, brine and dried over anhydrous MgSC4. The crude product was
purified by silica gel flash chromatography using 1:17 hexanes : EtOAc as eluent.
Yield: 2.53g (88%). JH NMR (400 MHz, CHLOROFORM-D) 8 1.42 (rn, 2 H), 1.73
(d, /=1.76 Hz, 1 H), 1.76 (d, 7=1.95 Hz, 1 H), 1.88 - 2.01 (m, 1 H), 3.22 (dd, 7=6,74,
5.57 Hz, 2 H), 3.42 (m, 2 H), 3.78 (s, 3 H), 4.01 (d, 7=4.30 Hz, 1 H), 4.04 (d; 7=3.51
Hz, 1 H), 6.48 (br.s, 1 H), 6.85 (d, 7=9.37 Hz, 1 H), 7.65 (br.s, 1 H), 8.03 - 8.09 (m, 2
tep D: Methyl {3-amino-4-[(tetrahydro-2fl-pyran-4-
ylmethyl)amino]phenyl}carbamate
Methyl {3-nitro-4-[(tetrahydro-2H-pyran-4-ylmethyl)amino]phenyl}carbamate
(2.53g, 8.18 mmol) was dissolved in 50 mL of EtOAc containing a catalytic amount
of 10% Pd/C. The solution was shaken under H2 atmosphere (40 psi) using a Parr
hydrogenation apparatus overnight at rt. The solution was filtered through Celite and
the solvent was evaporated. Yield: 2.29g (99%). ]H NMR (400 MHz,
CHLOROFORM-D) 5 1.40 (m, 2 H), 1.70 - 1.74 (m, 1 H), 1.74 -1.77 (m, 1 H), LSI -
1.92 (m, 1 H), 2.99 (d, J=6.64 Hz, 2 H), 3.34 (br.s, 2 H), 3.41 (m, 2 H), 3.74 (s, 3 H),
3.99 (d, J=3.51 Hz, 1 H), 4.02 (d, J=3.51 Hz, 1 H), 6.38 (br.s, 1 H), 6.55 - 6.60 (m, 1
H), 6.62 - 6.68 (m, 1 H), 6.95 (br.s, 1 H).
Step E: Methyl [2-to-/-but}'l-l-(tetrahydro-2H-pyran-4-ylmethyl)-lHbenzimidazoI-
5-yI]carbamate
Methyl {3-ammo-4-[(tetrahydro-2^-pyran-4-ylmethyl)arnino]phenyl}carbamate
(2.29g, 8.20 mmol) and DMAP (0.20g, 1.64 mmol) were dissolved in 75 mL of DCM.
Tlimethylacetyl chloride (1.10 mL, 9.02 mmol) was added dropwise and the solution
was stirred at rt for 2h. The solution was washed with aqueous NaHCOs solution,
brine and dried over anhydrous MgSC4. The residue was dissolved in 25 mL of
AcOH and was heated at 125°C for Ih using a Personal Chemistry microwave
apparatus. The solvent was evaporated. The residue was dissolved in EtOAc and
washed with aqueous NaHCOs solution, brine and dried over anhydrous MgSCV The
crude product was purified by silica gel flash chromatography using 4:3 / hexanes:
acetone as eluent. Yield: 1.81 g (64%). ]H NMR (400 MHz, CHLOROFORM-D) 5
1.48 -1.54 (m, 4 H), 1.56 (s, 9 H), 2.23 - 2.35 (m, 1 H), 3.27 - 3.35 (m, 2 H), 3.78 (s,
3 H), 3.96 (t, J=2.93 Hz, 1 H), 3.99 (t, J=3.03 Hz, 1 H), 4.18 (d, J=7.42 Hz, 2 H), 6.63
(br.s, 1 H), 7.24 - 7.28 (m, 1 H), 7.41 (br.s, 1 H), 7.61 (d, .7=1.95 Hz, 1 H).
StepF:2-to-^-Buryl-N-methyl-l-(tetrahydro-2H-pyran-4-ylmethyl)-lHb
enzimid azol-5-amine
Methyl [2-tert-butyl-l-(tetrahydro-2H-pyran-4-ylmethyl)-lH-benzimidazol-5-
yljcarbamate (l.SOg, 5.21 mmol) was dissolved in 75 mL of THF at 0°C. 1M
HCl/ether (7.3 mL, 7.29 mmol) was added dropwise and the solution was stirred at
0°C for 15 min. LiAffiU (988 mg, 26.1 mmol) was added slowly and the solution was
stirred at it overnight. The reaction was quenched at 0°C by the addition of MeOH (5
mL) followed by water (10 mL) and the solution was left to stir at rt for 30 min.
Anhydrous Na2SC4 (lOg) was added and the solution was stirred at rt for another 30
min. The solution was filtered and the solvent was evaporated. The residue was
dissolved in EtOAc and washed with aqueous NaHCOs solution, brine and dried over
anhydrous MgSO4. The solvent was evaporated. Yield: 1.54g (98%). 1HNMR(400
MHz, CHLOROFORM-D) 6 1.49 -1.53 (m, 4 H), 1.53 -1.57 (m, 9 H), 2.22 - 2.32
(m, 1 H), 2.87 (s, 3 H), 3.26 - 3.35 (m, 2 H), 3.95 (t, ^7=3.03 Hz, 1 H), 3.97 - 4.00 (m,
1 H), 4.13 (d, ,£=7.42 Hz, 2 H), 6.61 (dd, .£=8.59,2.15 Hz, 1 H), 6.99 (d, .£=1.95 Hz,
H), 7.1 l(d, .7=8.59 Hz, 1 H).
Example 2
N-[2-/;erf-Butyl-l-(tetrahydro-2H-pyraE-4-ylmethyl)-lH-ben2imidazol-5-yl]-Nmethylpropane-
-e-Butyl-N-methyl-l-(tetrahydro-2H-pyran-4-ylmethyl)-lH-benzimidazoI-5-
amine (for preparation, see Steps B to F of Example 1) (50 mg, 0.166 mmol) and a
catalytic amount of DMAP were dissolved in 5 mL of DCM. 1-Propanesulfonyl
chloride (0.024 mL, 0.216 mmol) was added dropwise and the solution was stirred at
rt for 3h. The solution was washed with saturated aqueous NaHCOs solution, brine
and dried over anhydrous MgSOThe product was purified by reversed-phase HPLC
using 10-70% CHsCN/HoO and lyophilized affording the title compound as the
corresponding TFA salt. Yield: 60 mg (69%); !H NMR (400 MHz, METHANOL-D4)
6 1.02 (t, J=7A2 Hz, 3 H), 1.54 -1.59 (m, 2 H), 1.60 - 1.66 (m, 2 H), 1.69 (s, 9 H),
1.76 - 1.83 (m, 2 H), 2.36 - 2.42 (m, 1 H), 3.09 - 3.13 (m, 2 H), 3.36 (m, 2 H), 3.40 (s,
3 H), 3.94 (d, /=3.58 Hz, 1 H), 3.95 (d, .7=3.58 Hz, 1 H), 4.55 (d, .7=7.68 Hz, 2 H),
7.70 (dd, /=8.96, 2.05 Hz, 1 H), 7.81 (d, .7=1.79 Hz, 1 H), 7.98 (d, J=8.96 Hz, 1 H);
MS (ESI) (M+H)+ 408.0.
Ar-[2-ter/-Butyl-l-(tetrahydro-2£T-pyran-4-ylmethyl)-ljfir-ben2iinidazol-5-yl]-
2-tert-Butyl-N-methyl-l-(tetrahydro-2H
(for preparation see Steps B, C, D, E and F of Example 1) (38 mg, 0.126 mmol) and
1-butanesulfonyl chloride (0.025 mL, 0.189 mmol) were stirred in 3 mL of DCM
containing a catalytic amount of DMAP at rt overnight The solvent was evaporated
and the product was purified by reversed-phase HPLC using 10-60% CH3CN/H2O
and lyophilized affording the title compound as the corresponding TFA salt Yield:
39 mg (58%). !H NMR (400 MHz, METHANOL-D4): 6 0.88 - 0.94 (m, 3 H), 1.43
(m, 2 H), 1.53 - 1.59 (m, 2 H,) 1.59 - 1.66 (m, 2 H), 1.69 (s, 9 H), 1.71 - 1.77 (m, 2
H), 2.35 - 2.42 (m, 1 H), 3.10 - 3.16 (m, 2 H), 3.35 (m, 2 H)3 3.40 (s, 3 H), 3.93 (d,
J=3.12 Hz, 1 H), 3.96 (d, J=3.71 Hz, 1 H), 4.54 (d, J=7.42 Hz, 2 H), 7.69 (dd, J=8.98,
2.15 Hz, 1 H), 7.81 (d, J=1.56 Hz, 1 H), 7.97 (d, J=8.98 Hz, 1 H); MS (ESI) (M+Hf
422.2; Anal. Calcd for €22^5^035 + 1.3 TFA 4- 12 H2O: C, 49.96; H, 6.60; N, 7.10.
Found: C, 49.98; H, 6.67; N, 6.83.
methylbutane-1-sulfonamide
Step A: Ar-{2-tert-Butyl-l-[(4,4-difluorocyclohexyl)methyl]-lJfir-benzimidazol-5-
yl] -N-methylb utane-1 -sulfonamid e
2-te7^-Butyl-l-[(4,4-difiuorocyclohexyl)methyl]-A':rnethyl-lf-benziniidazol-5-amine
(for preparation see following Steps B, C, D, E, F and G) (46 nag, 0.137 mmol) and
butanesulfonyl chloride (0.063 mL, 0.411 mmol) were stirred in 3 mL of DCM
containing a catalytic amount of DMAP at rt for 6h. The solvent was evaporated and
the product was purified by reversed-phase HPLC using 10-75% CHsCN/BbO and
lyophilized affording the title compound as the corresponding TFA salt. Yield: 48 mg
(62%). !H NMR (400 MHz, METHANOL-D4): 5 0.92 (t, J-7.32 Hz, 3 H), 1.43 (m, 2
H), 1.52 -1.63 (m, 2 H), 1.69 (s, 9 H), 1.70 -1.76 (m, 4 H), 1.76 -1.84 (m, 2 H), 2.02
- 2.12 (m, 2 H), 2.22 - 2.31 (m, 1 H), 3.10 - 3.17 (m, 2 H), 3.41 (s, 3 H), 4.56 (d,
J=7.62 Hz, 2 H), 7.69 (dd, J=8.98,2.15 Hz, 1 H), 7.82 (d, 3=1.76 Hz, 1 H), 7.96 (d,
J=9.18 Hz, 1 H); MS (ESI) (M+H)+456.
Step B: tert-Butyl [(4,4-difluorocyclohexyl)methyl]carbamate
F F
4-N-Boc-aminomethyl cyclohexanone (l.OOg, 4.4 mmol) was dissolved in 30 mL of
DCM at 0°C. DAST (1.45 mL, 11.0 mmol) was added dropwise and the solution was
stirred at it overnight. The solution was washed with aqueous 5% KHSC solution,
saturated aqueous NaHCOa solution, brine and dried over anhydrous MgSC4. The
crude product was purified by silica gel flash chromatography using 3:1 / hexanes :
EtOAc as eluent. Yield: 508mg (46%). !H NMR (400 MHz, CHLOROFORM-D): 8
1.19 - 1.36 (m, 2 H), 1.44 (s, 9 H), 1.51 - 1.56 (m, 1 H), 1.59 -1.7.5 (m, 2 H), 1.75 -
1.84 (m., 2 H), 2.01 - 2.16 (m, 2 H), 3.03 (t, J=6.54 Hz, 2 H), 4.62 (br.s, 1 H).
Step C: [(4,4-DifluorocyclohexyI)methyI]ainine hydrochloride
te7t-Butyl [(4,4-difluorocyclohexyl)methyl]carbamate (505 mg, 2.03 mmol) was
stirred in 5 mL of 1M HCl/AcOH at rt for 2h. The solvent was evaporated. The
residue was washed with ether, filtered and dried. Yield: 330 mg (88%). *H NMR
(400 MHz, METHANOL-D4): 6 1.28 - 1.40 (m, 2 H), 1.71 - 1.82 (m, 2 H), 1.84 (d,
.7=3.12 Hz, 2 H), 1.86 - 1.89 (m, 1 H), 2.03 - 2.15 (m, 2 H), 2.85 (d, .7=7.03 Hz, 2 H).
Step D: Methyl (4-{[(4,4-difluorocyclohexyl)methyl]amino}-3-
ng the same procedure as in Step C of Example 1 using [(4,4-
difluorocyclohexyl)methyl]amine hydrochloride (210 mg, 1.12 mmol), methyl (4-
fluoro-3-nitrophenyl)carbaniate (200 mg, 0.934 mmol) and TEA (0.390 mL, 2.80
mmol) in 10 mL of EtOH. The crude product was purified by silica gel flash
chromatography using 5% ether/DCM as eluent. Yield: 200 mg (62%). 3H NMR
(400 MHz, CHLOROFORM-D): 5 1.34 -1.47 (m, 2 H), 1.65 -1.75 (m, 2 H), 1.78 -
1.85 (m, 1 H), 1.90 - 1.93 (m, 1 H), 1.94 -1.97 (m, 1 H), 2.10 - 2.21 (m, 2 H), 3.23
(dd, J=6.64,5.66 Hz, 2 H), 3.78 (s, 3 H), 6.48 (br.s, 1 H), 6.83 (d, /=9.1S Hz, 1 H),
7.66 (br.s, 1 H), 8.05 (br.s, 1 H), 8.07 (d, J=2.54 Hz, 1 H).
Step E: Methyl (3-amino-4-{[(4,4-
Following the same procedure as in Step D of Example 1 using methyl (4-{[(434~
difluorocyclohexyl)methyl]amino}-3-nitroplienyl)carbamate (200 mg, 0.583 mmol)
and a catalytic amount of 10% Pd/C in 20 mL of EtOAc. Yield: 185 mg (99%).
MS(ESI)(M+H)+314.29.
Step F: Methyl {2-^/t-butyl-l-[(4,4-difluorocyclohexyl)methyl]-lfibenzimidazol-
Methyl (3-amino-4-{[(4,4-difluorocyclohexyl)niethyl]amino}phenyl)carbamate (185
mg, 0.590 mmol) and DMA? (15 mg, 0.118 mmol) were dissolved in 10 mL of DCM.
Trimethylaceryl chloride (0.080 mL, 0.649 mmol) was added dropwise and the
solution was stirred at rt for 2h. The solution was washed with aqueous NaHCOs
solution, brine and dried over anhydrous MgSO.. The solvent was concentrated. The
residue was dissolved in 4 mL of DCE and fyOs (catalytic) was added and the
solution was heated at 125°C for Ih using a Personal Chemistry microwave apparatus.
The solution was washed with aqueous NaHC03 solution, brine and dried over
anhydrous MgSC. The crude product was purified by silica gel flash
chromatography using 50 to 75% EtOAc / hexanes. Yield: 122 mg (54%); *H NMR
(400 MHz, CHLOROFORM-D): 5 1.43 - 1.52 (m, 2 H), 1.55 (s, 9 H), 1.57 -1.66 (m,
2 H), 1.67 -1.74 (m, 2 H), 2.08 - 2.18 (m, 3 H), 3.79 (s, 3 H), 4.19 (d, .7=7.42 Hz, 2
H), 6.63 (br.s, 1 H), 7.23 (d, .7=8.79 Hz, 1 H), 7.37 - 7.46 (m, 1 H), 7.62 (d, J=1.76
Hz, 1 H).
StepG:2-terf-ButyH-[(4,4-difluorocycIohexyl)methyl]-2V-methyl-lflrbenzimidazol-
5-araine
F F
Methyl {2-te;t-butyl-l-[(4,4-difluorocyclohexyl)methyl]-l/f-benzimidazol-5-
yl}carbamate (115 mg, 0.303 mmol) was dissolved in 10 mL of THF at 0°C. 1M
HCl/ether (0.425 mL, 0.424 mmol) was added and the solution was stirred at 0°C for
15 min. LiAHL, (57 mg, 1.52 mmol) was added slowly and the solution was stirred at
rt overnight The reaction was quenched at 0°C by the addition of MeOH (1 mL) and
water (2 mL). Anhydrous NaaSO4 (5.0 g) was added and the solution was stirred at rt
for 30 min. The solution was filtered and the solvent was evaporated. The residue
was dissolved in EtOAc and washed with saturated aqueous NaHCOs solution, brine
and dried over anhydrous MgSO4. Yield: 95 mg (93%). !H NMR (400 MHz,
CHLOROFORM-D): 5 1.41 -1.51 (m, 2 H), 1.54 (s, 9 H), 1.57 - 1.67 (m, 2 H), 1.68 -
1.76 (m, 3 H), 2.07 - 2.17 (m, 3 H), 2.87 (s, 3 H), 4.15 (d, .7=7.42 Hz, 2 H), 6.61 (dd,
J=8.59,2.34 Hz, 1 H), 7.01 (d,.7=1.95 Hz, 1 H), 7.09 (d, .7=8.59 Hz, 1 H).
Example 5
7V-MethylT/V-[l-(tetrahydro-21
benzimidazo}-5-yl]propane-l-sulfonamide
Step A: A-Methyl-7V-[l-(tetrahydro-2flr-pyran-4-ylniethy])-2-(trifluoromethyl)-
l/f-benzimidazoI-S-ylJpropane-l-sulfonamide
Propane-1-sulfonyl chloride (27 uL, 34 rug, 0.24 mmol) was added to a solution of JVme1hyl-
l-(tetrahydio-2H-pyran-4-yknethyl)-2-(trifluoromefliyl)-l^-beiiziniidazol-5-
amine (63 mg, 0.20 mmol) (see following steps B, C, D, E, F and G for preparation),
DIPEA (49 uL, 36 mg, 0.28 mmol) and DMAP (5 mg, 0.04 mmol) inDCM (6 mL) at
0 °C. The reaction mixture was stirred overnight at room temperature, diluted with
DCM (50 mL), washed with saturated NaHCO3 (2x10 mL) and dried over Na2SO4.
The crude product was purified by MPLC using Hex/EtOAc (1:1) on silica gel to give
40 mg (47%) of a white solid as the title compound. ]HNMR (400 MHz,
METHANOL-D4): 8 1.00 (t, J=7.42 Hz, 3 H), 1.38 - 1.53 (m, 4 H), 1.70 - 1.88 (rn, 2
H), 2.15 - 2.30 (m, 1 H), 3.01 - 3.11 (m, 2 H), 3.28 - 3.33 (m, 2 H), 3.35 (s, 3 H), 3.88
- 3.91 (m, 2 H), 4.30 (d, J=7.62 Hz, 2 H), 7.55 (dd, JN8.79,1-76 Hz, 1 H), 7.75 (d,
J=8.98 Hz, 1 H), 7.82 (d, J=1.56 Hz, 1 H). MS (ESI) (M+H)+ = 420.0. Anal. Calcd
for C]8H24F3N303S+ 0.20 H2O+0.30 CH3OH(432.68): C, 50.80; H, 5.96; N, 9.71;
Found: C, 50.79; R, 5.91; N, 9.69.
Step B. JV-(4-fluoro-3-nitrophenyl)acetamide
4-FIuoro-3-nitro-aniUne (45.0 g, 0.288 mol) was added in portions to acetic anhydride
(150 mL) at room temperature. The reaction mixture was stirred at room temperature
for 2 h. The white solid was collected and dried in vacua to give the title compound
(42.0 g, 70%). !H NMR (400 MHz, CHLOROFORM-D): 6 223 (s, 3 H), 726 (m, 1
H), 7.50 (s broad, 1 H), 7.87 (m, 1 H), 8.23 (dd, /=6.44,2.73 Hz, 1 H).
Sodium hydride (4.22 g, 60%, 106 mmol) was added portionwise to a solution of 7V-
(4-fluoro-3-nitrophenyl)acetamide(13.9 g, 70 mmol) hi THF (200 mL) at 0 °C.
Stirring for 20 min, iodomethane (18.5 g, 130 mmol) was added. The reaction mixture
was stirred at room temperature for 2 h, quenched with saturaed NaHCOj (30 mL)
and extracted with EtOAc (3x100 mL). The combined organic phases were washed
with saturated NaCl (2x50 mL). After filtration and concentration, 13.1 g (88%) of the
title compound was obtained as a yellow solid. *H NMR (400 MHz,
CHLOROFORM-D): 5 1.92 (s, 3 H), 3.30 (s, 3 H), 7.38 (s, 1 H), 7.52 (s, 1 H), 7.95
(s, 1 H).
4-Aminomethyltetrahydropyran (10.0 g, 86.5 mmol) was added to a mixture of N-(4-
fluoro-3-nitrophenyl)-/V-methylacetainide (15.6 g, 73.3 mmol) and TEA (15.3 mL,
11.1 g, 110 mmol) in EtOH (300 mL) at room temperature. The reaction mixture was
heated for 6 h at reflux. Upon evaporation of ethanol, the residue was dissolved in
EtOAc (400 mL), washed with H2O (3x50 mL), saturated NaCl (3x50 mL), and dried
over Na2SO4- After filtration and concentration, 21.7 g (96%) of the title compound
was obtained as an orange-red solid. !H NMR (400 MHz, CHLOROFORM-D).. 8
1.38 - 1.52 (m, 2 H), 1.72 - 1.81 (m, 2 H), 1.90 (s, 3 H), 1.93 - 2.02 (m, 1 H), 3.23 (s,
3 H), 3.23 - 3.27 (m, 2 H), 3.36 - 3.49 (m, 2 H), 4.01 - 4.07 (m, 2H), 6.91 (d, .7=9.18
Hz, 1 H), 7.29 (dd, J=9.08, 2.64 Hz, 1 H), 8.05 (d, .7=2.34 Hz, 1 H), 8.22 (t, J=5.37
Hz, 1 H). MS (ESI) (M+H)+ = 309.12.
7V-Methyl-7V'-{3-niixo^-[(tetrahydto-27f-pyran4-ylmethyl)amino]phenyl}acetamide
(21.7 g, 70.5 rnmol) was hydrogenated in ethyl acetate (500 mL) catalyzed by 10%
Pd/C (1.0 g) at 30-40 psi H2 in Parr shaker for 18 h at room temperature. After
filtration through celite and concentration, 19.6 g (100%) of a purple solid was
obtained. 'H NMR (400 MHz, CHLOROFORM-D): 8 1.35 -1.50 (m, 2 H), 1.67 (s,
1 H), 1.73 -1.81 (m, 2 H), 1.88 (s, 3 H), 1.88-1.99 (m, 1 H), 3.04 (d, .7=6.64 Hz, 2
H), 3.20 (s, 3 H), 3.33 - 3.48 (m, 4 H), 3.97 -4.08 (m, 2 H), 6.54 (d,.7=1.76 Hz, 1 H),
6.60 - 6.63 (m, 2 H); MS (ESI) (M+H)+: 278.7
StepF. jV-Methyl-7V-[l-(tetrahydro-2£r-pyran-4-ylmethyl)-2-(trifluoromethyl)-
IJJ-benzimidazoI-S-ylJacetamide
A solution of A{3-amino4-[(tetrahydro-2pyran-4-ylmethyl)amino]phenyl}-7Vmethylacetarnide
hydrochoride (2.77 g, 10 mmol) in trifluoroacetic acid (60 mL) was
heated to reflux for 18 h. After evaporation of the solvent, the residue was dissolved
in EtOAc (200 mL), washed with 2/VNaOH (2x10 mL) and dried over Na2S04. The
crude product was purified by MPLC using EtOAc on silica gel to give 3.18 g (90%)
of a white solid as the title compound. MS (ESI) (M+H)+ = 356.02.
StepG. 7V-Methyl-l-(tetrahydro-2jEf-pvran-4-yliuethyI)-2-(trifluoromethyl)-lffbenzimidazol-
5-amine
l'N-[ 1 -(tetrahydro-2Jy-pyran-4-ylmethyl)-2-(triiluoroniethyl)- IHbenzimidazol-
5-yl]acetamide (3.18 g, 8.95 mmol) was dissolved in hydrochloric acid
(37%, 60 mL) and then heated overnight at 95°C. After concentration, the residue was
treated with 20 mL of 2NNaOH, extracted with EtOAc (4x50 mL). The combined
organic phases were washed with brine (20 mL) and dried over Na2SO4. After
evaporation, 2.80 g (100%) of a purple white solid was obtained as the title product,
which was used directly for Step H. MS (ESI) (M+H)+ = 3 14.20.
procedure in Example 5, using cyclopropanesulfonyl chloride (34 mg,
0.24 mmol), jY-methyl- l-(tetrahydro-2Jff-p}'ran-4-yhnethyl)-2-(trifluoromethyl)- IHbenamidazol-
S-amine (63 mg, 0.20 mmol) (for preparation, see the step G in example
1), DIPEA (49 uL, 36 mg, 0.28 mmol) and DMAP (5 mg, 0.04 mmol) in DCM (6
mL) at 0 °C. The crude product was purified by MPLC using Hex/EtOAc (1:1) on
silica gel to give 81 mg (97%) of a white solid as the title compound. 1HNMR (400
MHz, METHANOL-D4): 6 0.85 - 0.92 (m, 2 H), 0.93 -1.01 (m, 2 H), 1.37 - 1.52 (m,
4 H), 2.18 - 2.31 (m, 1 H), 2.55 - 2.65 (m, 1 H), 3.30 - 3.36 (m, 2 H), 3.38 (s, 3 H),
3.86 - 3.95 (m, 2 H), 4.32 (d, J=7.62 Hz, 2 H), 7.58 (dd, J=8.89,2.05 Hz, 1 H), 7.76
(d, J=8.79 Hz, 1 H) 7.86 (d, J=1.95 Hz, 1 H). MS (ESI) (M+H)* = 418.0. Anal.
Calcd for C18H22F3N3O3S+ 0.10 H2O+0.20 CH3OH (425.66): C, 51.36; H, 5.45; N,
9.87; Found: C, 51.39; H, 5.49; N, 9.92.
Example 7
A [2-fe/-/-Butyl-l-(tetrahydro-2H-pyran-4-yhnethyl)-lflr-benzimidazol-5-yl]-A'-
methylpentane-1-sulfonamide
2-tert-Butyl-N-methyH-(tetrahydro-2H-pyran-4-ylmethyl)-lH-benzimidazol-5-amine
(65 mg, 0.216 mmol) and a catalytic amount of DMAP were dissolved in 3 mL of
DCE. n-Pentylsulfonyl chloride (44 mg, 0.259 mmol) was added and the solution was
stirred at rt for 4h. The solution was washed with saturated aqueous NaHCOs
solution, brine and dried over anhydrous MgSO4. The solvent was evaporated and the
product was purified by reversed-phase HPLC using 10-70% CH3CN/H2O and
lyophilized affording the title compound as the corresponding TFA salt Yield: 89 mg
(75%). 1HNMR(400MHz, METHANOL-D4) 8 0.89 (t, .7=7.13 Hz, 3 H), 1.26 - 1.34
(m, 2 H), 1.34 - 1.43 (m, 2 H), 1.52 - 1.58 (m, 2 H), 1.58 -1.66 (m, 2 H), 1.69 (s, 9
H), 1.71 -1.80 (m, 2 H), 2.34 - 2.43 (m, 1 H), 3.09 - 3.16 (in, 2 H), 3.36 (td, /=11.47,
2.64 Hz, 2 H), 3.40 (s, 3 H) 3.93 (d,.7=3.12Hz, 1 H), 3.95 - 3.97 (m, 1 H), 4.55 (d,
/=7.62 Hz, 2 H), 7.69 (dd, J=9.08,2.05 Hz, 1 H), 7.81 (d, J=1.56 Hz, 1 H), 7.97 (d,
8.59 Hz, 1 H); MS (ESI) (M.+E)+436.0; Anal. Calcd(%) for €23^7^038 + 1.1
TFA + 0.9 H2O; C, 52.43; H, 6.97; N, 7.28. Found: C, 52.39; H, 6.96; N, 7.43.
A [2-teButyl-l-(tetrahydro-2F-pyran-ylmethyl)~lJ9r-ben2amidazol-5-yl]-A?'-
methylethanesulfonamide
(50 mg, 0.166 mmol) and a catalytic amount of DMAP were dissolved in 3 mL of
DCE. Ethanesulfonyl chloride (0.020 mL, 0.215 mmol) was added and the solution
was stirred at rt for 12h. The solution was washed with saturated aqueous NaHCOs
solution, brine and dried over anhydrous MgSO/j. The solvent was evaporated and the
product was purified by reversed-phase HPLC using 10-70% CHsCN/KbO and
lyophilized affording the title compound as the corresponding TFA salt. Yield: 70 mg
(83%). :HNMR (600 MHz, CD3OD) 5 1.31 (t, .7=7.30 Hz, 3 H), 1.53 -1.58 (m, 2 H),
1.58 - 1.65 (m, 2 H), 1.69 (s, 9 H), 2.35 - 2.42 (m, 1 H), 3.16 (m, 2 H), 3.35 (m, 2 H),
3.41 (s, 3 H), 3.94 (d, J=3.84 Hz, 1 H), 3.95 (d, .7=3.84 Hz, 1 H), 4.54 (d, .7=7.68 Hz,
2 H), 7.69 (dd, 7=9.09,1.92 Hz, 1 H), 7.81 (d, .7=1.79 Hz, 1 H), 7.97 (d, J=8.96 Hz, 1
H); MS (ESI) (M+H)+ 394.0; Anal. Calcd(%) for CaoHjiNsOsS + 1.4 TFA: C, 49.50;
E, 5.90; N, 7.60. Found: C, 49.51; H, 6.00; N, 7.24.
Example 9
dimethyIpropane-2-sulfonamide
2-tert-Butyl-N-methyl- 1 -(tetrahydro-2H-pyran-4-ylmethyl)- lH-benzimidazol-5-amine
(50 ing, 0.166 mmol) and DMAP (20 mg, 0.166 mmol) were dissolved in 3 mL of
DCM. t-Butylsulfinyl chloride (0.027 mL, 0.215 mmol) was added and the solution
was stirred at rt for 2h. The solution was washed with saturated aqueous NaHC03
solution, brine and dried over anhydrous MgSO/. 3-Chloroperoxybenzoic acid (37
mg, 0.166 mmol) was added and the solution was stirred at rt for Ih. The solution
washed with saturated aqueous NaHCOs solution, brine and dried over anhydrous
MgS04- The product was purified by reversed-phase HPLC using 10-70%
CHsCN/HaO and lyophilized affording the title compound as the corresponding TFA
salt Yield: 34 mg (38%). !H NMR (400 MHz, METHANOL-D4) 8 1.37 (s, 9 H),
1.52 - 1.58 (m, 2 H), 1.59 - 1.66 (m, 2 H), 1.69 (s, 9 H), 2.34 - 2.44 (m, 1 H), 3.36 (m,
2 H), 3.48 (s, 3 H), 3.93 (d, .7=3.32 Hz, 1 H), 3.95 - 3.97 (m, 1 H), 4.54 (d, J=7.62 Hz,
2 H), 7.78 (dd, 7=9.08, 2.05 Hz, 1 H), 7.92 (d, /=2.15 Hz, 1 H), 7.96 (d, J=9.1 8 Hz, 1
H); MS (ESI) (M+H)+ 422.0.
Example 10
Ar-{2-ter/-Butyl-l-[(4,4-difluorocyclohexyl)methyI]-lJff-benzimidazol-5-yl}-Armethylpropane-
1-sulfonamide
2-tert-Buryl-l-[(4,4-difluorocyclohexyl)methyl]-Ar-methyl-l/T-benzimidazol-5-amine
(45 mg, 0.134 mmol) and a catalytic amount of DMAP were dissolved in 3 mL of
DCE. Propanesulfonyl chloride (0.020 mL, 0.174 mmol) was added and the solution
was stirred at rt for 4h. The solution was washed with saturated aqueous NaHCOs
solution, brine and dried over anhydrous MgSC4. The solvent was evaporated and the
product was purified by reversed-phase HPLC using 10-70% CHsCN/BfeO and
lyophilized affording the title compound as the corresponding TFA salt. Yield: 55 mg
(74%). 1E NMR (400 MHz, METHANOL-D4) 8 1.00 (t, .7=7.42 Hz, 3 H), 1.51 -1.60
(m, 2 H), 1.66 (s, 9 H), 1.68 - 1.73 (m, 2 H), 1.73 - 1.81 (m, 4 H), 2.00 - 2.11 (m, 2
H), 2.18 - 2.29 (m, 1 H,) 3.06 - 3.12 (m, 2 H), 3.38 (s, 3 H), 4.54 (d, 7=7.62 Hz, 2 H),
7.67 (dd, J=9.0S, 2.05 Hz, 1 H), 7.79 (d, .7=1.56 Hz, 1 H), 7.94 (d, .7=8.98 Hz, 1 H);
MS (ESI) (M+H)+442.0; Anal. Calcd(%) for C&HssNsCfeSFa + 1.0 TFA+ 1.6 H2O:
C, 49.32; H, 6.42; N, 7.10. Found: C, 49.39; H, 6.66; N, 6.71.
Ar-{2-tert-Butyl-l-[(4,4-difluorocyclohexyl)methyl]-lJ7-benziinidazol-5-yl}-Armethylethanesulfonamide
2-fe;Y-Butyl-l-[(4,4-difluorocyclohexyl)memyl]-Amemyl-ljff-ben2iniidazol-5-amme
(49 mg, 0.146 mmol) and a catalytic amount of DMAP were dissolved in 3 mL of
DCM. Ethanesulfonyl chloride (0.018 mL, 0.190 mmol) was added and the solution
was stirred at rt for 12h. The solution was washed with saturated aqueous NaHCOa
solution, brine and dried over anhydrous MgSCV The solvent was evaporated and the
product was purified by reversed-phase HPLC using 10-70% CHsCN/H^O and
lyophilized affording the title compound as the corresponding TFA salt Yield: 58 mg
(73%). !HNMR (600 MHz, MeOD) 8 1.31 (t,.7=7.42 Hz, 3 H), 1.34 - 1.41 (m, 2 H),
1.54 -1.62(m,2H), 1.69 (s,9H), 1.72 - 1.80(m,2H),2.03 -2.11 (m,2H),2.23 -
2.30 (m, 1 H), 3.17 (q,/=725 Hz, 2 H), 3.41 (s, 3 H), 4.56 (d, J=7.68 Hz, 2 H), 7.70
(dd, .7=8.96,2.05 Hzs 1 H)3 7.82 (d, .7=2.05 Hz, 1 H), 7.96 (d, 7=8.96 Hz,1 H); MS
(ESI) (M+H)+428.0.
2-te/-Butyl-l-[(4,4-difluorocyclohexyl)methyl]-l/f-benzimidazoI-5-ainine(for
preparation, see the following steps B to E) (45 mg, 0.140 mmol) and a catalytic
amount of DMAP were dissolved in 3 mL of DCM. Propanesulfonyl chloride (0.020
mL, 0.182 mmol) was added and the solution was stirred at rt for 4h. The solution
was washed with saturated aqueous NaHCOs solution, brine and dried over anhydrous
MgSCU- The solvent was evaporated and the product was purified by re versed-phase
HPLC using 10-70% CHsCN/EkO and lyophilized affording the title compound as the
corresponding TFA salt. Yield:'39 mg (51%). JH NMR (600 MHz, CD3OD)5 1.00
(t, J=7.55 Hz, 3 H), 1.53 -1.61 (m, 2 H), 1.67 (s, 9 H), 1.70 - 1.77 (m, 3 H), 1.77 -
1.85 (in, 3 H), 2.02 - 2.11 (m, 2 H), 2.22 - 2.29 (m, 1 H), 3.08 - 3.13 (m, 2 H), 4.53 (d,
/=7.42 Hz, 2 H), 7.41 (dd, /=9.09,1.92 Hz, 1 H), 7.75 (d, /=1.79 Hz, 1 H), 7.89 (d,
J=9.22 Hz, 1 H); MS (ESI) (M+H) 42S.O.
StepB:7V-(4-{[(4,4-Difluorocyclohexyl)methyl]amino}-3-nitrophenyI)acetamide
A (4-Fluoro-3-niixophenyl)acetamide (1.15 g, 5.84 mmol) and [(4,4-
difluorocyclohexyl)methyl]amine hydrochloride (1.30g, 7.59 mmol) were stirred in
30 mL of EtOH containing TEA (2.40 mL, 17.5 mmol) at 80°C for 4Sh. The solvent
was evaporated. The residue was dissolved in EtOAc and washed with aqueous 5%
KHSO4 solution, saturated aqueous NaHCCsolution, saturated aqueous NaCl
solution and dried over anhydrous NaaSOThe product was crystallized from
EtOAc. The left over mother liquor was purified by silica gel flash chromatography
using 2:1 / hexanes.:acetone as eluent. Yield: 1.50 g (78%). JH NMR (400 MHz,
CHLOROFORM-D) 5 1.33 - 1.47 (m, 2 H), 1.66 - 1.77 (m, 2 H), 1.77 - 1.86 (m, 1 H),
1.89 - 1.93 (m, 1 H), 1.93 - 1.97 (m, 1 H), 2.10 - 2.17 (m, 2 H), 2.18 (s, 3 H), 3.23 (dd,
J=6.74, 5.76 Hz, 2 H), 6.83 (d, J=9.27 Hz, 1 H), 7.15 (s, 1 H), 7.80 (dd, J=9.1S, 2.54
Ar-(4- {[(4,4-Difluorocyclohexyl)methyl]amino} -3-nitrophenyl)acetamide (1.48 g,
4.52 mmol) was dissolved in 50 mL of EtOAc containing a catalytic amount of 10%
Pd/C. The solution was shaken in a Parr hydrogenation apparatus under Ha
atmosphere (45 psi) at rt for 24h. The solution was filtered through Celite and the
solvent was evaporated. Yield: 1.32 g (98%). JH NMR (400 MHz, CHLOROFORMD)
5 1.31 - 1.43 (m, 2 H), 1.64 - 1.73 (m, 2 H), 1.74 -1.82 (m, 1 H), 1.89 -1.93 (m, 1
H), 1.93 -1.96 (m, 1 H), 2.08 - 2.17 (m, 5 H), 3.00 (d, /=6.64 Hz, 2 H), 3.27 - 3.46
(m, 2 H), 6.55 (d, J=8.40 Hz,. 1 H), 6.70 (dd, J=8.40,2.34 Hz, 1 H), 7.01 (s, 1 H), 7.13
(d3J=2.34Hz,lH).
Step D: Ar-{2-tert-Butyl-l-[(4,4-difluorocycIohexyl)methyl]-l£r-benzimidazoI-5-
yl}acetamide
//-(S-Aminol-difluorocyclohexymethyljaminoJphenyl) acetamide (1.32 g ,
4.44 mmol) was dissolved in 100 mL of DCM containing DMAP (108 mg, 0.89
mmol). Trimethylaceiyi chloride (0.60 mL, 4.88 mmol) was added dropwise and the
solution was stirred at rt for 2h. The solution was washed with saturated aqueous
NaHCOa solution, saturated aqueous NaCl solution and dried over anhydrous Na2SO4.
Part of the product precipitated during the washings and was filtered. The organic
phase was evaporated and combined with the precipitate. The product was dissolved
in 30 mL of AcOH and placed in 6 sealed tubes (5 mL/tube). Each tube was heated at
150°C in a Personal Chemistry microwaves instrument for 2.5h. The fractions were
pooled and the solvent was evaporated. The product was dissolved in EtOAc and
washed with aqueous NaHCOs solution, saturated aqueous NaCl solution and dried
over anhydrous NaoSO The product was purified by silica gel flash chromatography
using 2:1 / acetone:hexanes as eluent. Yield: 1.11 g (68%). :H NMR (400 MHz,
METHANOL-D4) 6 1.40 - 1.49 (m, 2 H), 1.52 (s, 9 H), 1.60 - 1.65 (m, 2 H), 1.67 -
1.77 (m, 1 H), 1.96 - 2.06 (m, 3 H), 2.11 (s, 3 H), 2.15 - 2.23 (m, 1 H), 4.28 (d, 7=7.62
Hz, 2 H), 7.35 - 7.39 (m, 1 H), 7.40 - 7.44 (m, 1 H), 7.85 (d, 7=1.76 Hz. 1 H).
StepE:2-tert-Butyl-l-[(4,4-difluorocyclohexyI)methyI]-lflr-ben2iraidazoI-5-amme
?/-{2-re7t-But5d-l-[(4,4-difluorocyclohexyl)methyl]-lff-benzirDidazol--5-yl}acetaniide
(500 mg, 1.37 mmol) was dissolved in 10 mL of 1:1 / EtOH:2M HC1. The solution
was divided into two sealed tubes (5 mL/tube). Each tube was heated at 120°C in a
Personal Chemistry microwaves instrument for Ih. The fractions were pooled and the
solvent was evaporated. The residue was diluted with 2M NaOH and extracted (3X)
with EtOAc. The organic phase was washed with saturated aqueous NaCl solution
and dried over anhydrous NaaSO The solvent was evaporated. Yield: 440 mg
(99%). !H NMR (400 MHz, CHLOROFORM-D) 5 1 .40 - 1 .52 (m, 2 H), 1 .52 - 1 .54
(m, 9 H), 1.56 - 1.66 (m, 4 H), 1.68 - 1.75 (m, 2 H), 2.07 - 2.17 (m, 3 H), 4.14 (d,
7=7.62 Hz, 2 H), 6.65 (dd} 7=8.50, 2.25 Hz, 1 H), 7.04 - 7.09 (m, 2 H).
-{2-te/-r'-ButyI-l-[(454-difluorocyclohexyl)niethyl]-lJ:f-beii2imidazol-5-
yl}methanesulfonamide
2-tert-Butyl-1 -[(4,4-difluorocycIohexyl)methyl]- l#-benziiiiidazol-5-amine (40 mg,
0.124 nxmol) and a catalytic amount of DMAP were dissolved in 3 mL of DCM.
Methanesutfonyl chloride (0.012 mL, 0.149 mmol) was added and the solution was
stirred at rt for 2h. The solution was washed with saturated aqueous NaHCOs
solution, brine and dried over anhydrous MgSCXj. The solvent was evaporated and the
product was purified by reversed-phase HPLC using 10-70% CHsCN/HaO and
lyophilized affording the title compound as the corresponding TFA salt. Yield: 50 mg
(79%). 'HNMR^OO MHz,MeOD) 5 1.53 -1.61 (m,2H), 1.67(s,9H), 1.71 - 1.76
(m, 3 H), 1.76 -1.82 (m, 1 H), 2.04 - 2.11 (m, 2 H), 2.23 - 2.29 (m, 1 H), 3.01 (s, 3
H), 4.54 (d, J-7.68 Hz, 2 H), 7.42 (dd, 9.22,2.05 Hz, 1 H), 7.75 (d, J=L79 Hz, 1
H), 7.91 (d, .7=8.96 Hz, 1 H); MS (ESI) (M+H)+400.0; Anal. Calcd(%) for
CigH^NaCWz + 1.9 TFA + 0.1 H2O: C, 44.32; H, 4.75; N, 6.80. Found: C, 44.34;
JV-{2-fe;'/-Butyl-l-[(4,4-difluorocyclohexyI)methyI]-l-benzimidazol-5-
yl} ethanesulf on amide
2-tert-Butyl-l -[(4,4-difluorocyclohexyl)methyI]-lJ:r-benzirQidazol-5-amine (440 mg,
1.37 mmol) and DMAP (165 mg, 1.37 mmol) were dissolved in 50 mL of DCM.
Ethanesulfonyl chloride (0.170 mL, 1.78 mmol) was added dropwise and the solution
was stirred at rt for 2.5h. The solution was washed with saturated aqueous NaHCOa
solution, saturated aqueous NaCl solution and dried over anhydrous Na2$O4. The
product was purified by silica gel flash chromatography using EtOAc as eluent. The
fractions were concentrated and the residue -was dissolved in 25 mL.of MeOH. TFA
(0.155 mL, 2.06 mmol) was added dropwise and the solution was stirred at rt for 30
min. The solvent was evaporated and the product was precipitated in ether affording
the title compound as its corresponding TFA salt. Yield: 565 mg (78%). !H NMR
(400 MHz, METHANOL-D4) 6 1.29 (t, .7=7.42 Hz, 3 H), 1.48 -1.60 (m, 2 H), 1.64 (s,
9 H), 1.66 - 1.72 (m, 2 H), 1.73 - 1.82 (m, 2 H), 1.99 - 2.09 (m, 2 H), 2.18 - 2.28 (m, 1
H), 3.11 (m, 2 H), 4.50 (d, .7=7.62 Hz, 2 H), 7.38 (dd, .7=9.08, 2.05 Hz, 1 H), 7.72 (d,
.7=2.15 Hz, 1 H), 7.85 (d, .7=8.98 Hz, 1 H); MS (ESI) (M+H)+ 414.0.
Example 15
7V-{2-/er?-Butyl-l-[(4,4-dlfluorocycIohexyI)methyl]-15r-ben2imidazoI-5-
yl}cyclopropanesulfonamide
2-?e^Butyl-l-[(4,4-difluorocyclohexyl)methyl]-l-?7-benzimidazol-5-amme(300mg,
0.934 mmol) and DMAP (115 mg, 0.934 mmol) were dissolved in 10 mL of DCM.
Cyclopropanesulfonyl chloride (170 mg, 121 mmol) was added and the solution was
stirred at rt for 2h. The solution was washed with saturated aqueous NaHCOs
solution, brine and dried over anhydrous MgSCXt. The product was purified by silica
gel flash chromatography using EtOAc as eluent. The fractions were concentrated
and the residue was dissolved in 25 mL of MeOH. TFA (0.143 mL, 1.86 mmol) was
added dropwise and the solution was stirred at rt for 30 rnin. The solvent was
evaporated and the product was precipitated in ether affording the title compound as
its corresponding TFA salt. Yield: 390 mg (77%). ]H NMR (400 MHz,
METHANOL-D4) 5 0.91 - 0.97 (m, 2 H), 1.02-1.08 (m, 2 H), 1.48 -1.60 (m, 2 H),
1.65 (s, 9 H), 1.67 -1.75 (m, 3 H), 1.75 -1.82 (m, 1 H), 2.00 - 2.10 (m, 2 H), 2.18 -
2.28 (m, 1 H), 2.53 - 2.61 (m, 1 H), 4.50 (d,.7=7.42 Hz, 2 H), 7.42 (dd,.7=8.98,2.15
Hz, 1 H), 7.74 (d, J=L56Hz, 1 H), 7.85 (d, .7=8.79 Hz, 1 H); MS (ESI) (M+H)+
426.0; Anal. Calcd(%) for C2]H29N3O2SF2 + 1.0 TFA; C, 51.20; H, 5.60; N, 7.79.
Found: C, 51.38; H, 5.66; N, 7.56.
A2-/ert-Butyl-l-[(4,4-difluorocycIohexyl)methyl]-lJ8r-benzimidazol-5-yl}-methylcycloprop anesulfonamide
2-tert-Butyl-l-[(4,4-difluorocyclohexyl)metliyl]-l/f-benzimidazol-5-amine(65mg,
0.202 mmol) and a catalytic amount of DMAP were dissolved in 5 mL of DCM.
Cyclopropanesulfonyl chloride (34 mg, 0.242 mmol) was added and the solution was
stirred at rt for 6h. The solution was washed with saturated aqueous NaHCO3
solution, brine and dried over anhydrous MgSC4. The solvent was evaporated. The
residue was dissolved in 5 mL of DMF at 0°C and NaH (12 mg, 0.303 mmol) was
added. The solution was stirred at 0°C for 15 min. Methyl iodide (0.025 mL, 0.404
mmol) was added and the solution was stirred at rt for 2h. The reaction was quenched
with saturated aqueous NaHCOa solution and the solvent was evaporated. The
product was dissolved in EtOAc and washed with aqueous NaHCOs solution,
saturated aqueous NaCl solution and dried over anhydrous NaaSC^. The solvent was
evaporated and the product was purified by reversed-phase HPLC using 10-70%
CHsCN/HaO and lyophilized affording the title compound as the corresponding TPA
salt. Yield: 6Q mg (54%). H NMR (600 MHz, CD3OD) 5 0.90 - 0.94 (m, 2 H), 0.97
- 1.01 (m, 2 H), 1.54 - 1.62 (m, 2 H), 1.68 (s, 9 H), 1.73 - 1.81 (m, 4 H)5.2.03 - 2.11
(m, 2 H), 2.23 - 2.30 (m, 1 H), 2.59 - 2.65 (m, 1 H), 3.43 (s, 3 H), 4.56 (d, J=7.68 Hz,
2 H), 7.72 (d, 7=9.47 Hz, 1 H), 7.81 (s, 1 H), 7.95 (d, 7=8.96 Hz, 1 H); MS (ESI)
(M+H)+ 440.0.
Example 17
JV-{2-/e;f-Butyl-l-[(4,4-difluorocyclohexyl)methyl]-lHr-ben2imidazoI-5-yl}-2-
m ethylpropane-2-suIfonamide
2-te/t-Butyl-1 -[(4J4-difluorocycIohexyl)methyl]-ljy-benzimidazol-5-amine (66 mg,
0.205 mmol) and DMAP (25 mg, 0.205 mmol) were dissolved in 5 mL of DCM. t-
Butylsulfinyl chloride (0.031 mL, 0.246 mmol) was added and the solution was
stirred at it for 2h. The solution was washed with saturated aqueous NaHCOs
solution, brine and dried over anhydrous MgSO4. 3-Chloroperoxybenzoic acid (90
mg, 0.410 mmol) was added and the solution was stirred at rt for 12h. The solution
washed with saturated aqueous NaHCOs solution, brine and dried over anhydrous
MgSO4- The product was purified by reversed-phase HPLC using 10-70%
CHaCN/HaO and lyophilized affording the title compound as the corresponding TFA
salt Yield: 55 mg (48%). :H NMR (400 MHz, METHANOL-D4) 8 1.35 (s, 9 H),
1.49 - 1.60 (m, 2 H), 1.64 (s, 9 H), 1.68 -1.75 (m, 3 H), 1.76 - 1.S2 (m, 1 H), 2.00 -
2.09 (m, 2 H), 2.19 - 2.28 (m, 1 H), 4.50 (d, J=1A2 Hz, 2 H), 7.42 (dd, J=9.08, 2.05
Hz, 1 H), 7.S1 - 7.86 (m, 2 H); MS (ESI) (M+H)+ 442.0; Anal. Calcd(%) for
C22H33N3O2SF2 + 1.2 TFA + 0.2 H2O; C, 50.35; H, 5.99; N, 7.22. Found: C, 50.36;
H, 5.73; N, 7.08.
JV-[l-[(4}4-Difluorocyclohexyl)methyl]-2-(l,l-difluoroethyl)-l/f-benzimidazol-5-
yljacetamide (for preparation see the following step B) (95 rug, 0.256 mmol) was
heated in 5 raL of 1:1 / 2M HClrEtOH at 120°C for Ih using a Personal Chemistry
microwaves instrument. The solvent was evaporated. The residue was basified with
2M NaOH and extracted (3X) with EtOAc. The organic phase was washed with
saturated aqueous NaCl solution and dried over anhydrous Na2SC4. The solvent was
evaporated. The product was dissolved in 5 mL of DCM containing DMAP (31 mg,
0.256 mmol) and cyclopropanesulfonyl chloride (53 mg, 0.384 mmol) was added.
The solution was stirred at rt for 3h. The solution was washed with saturated aqueous
NaHCOs solution, brine and dried over anhydrous MgSCV The solvent was
evaporated and the product was purified by reversed-phase HPLC using 10-70%
CH3CN/H2O and lyophilized affording the title compound as the corresponding TFA
salt Yield: 35 mg (25%). ]H NMR (400 MHz, METHANOL-D4) 5 0.88 - 0.95 (m, 2
H), 0.98 - 1.03 (m, 2 H), 1.39 -1.51 (m, 2 H),1.61 -1.68 (m, 3 H), 1.70 - 1.79 (m, 1
H), 2.03 (s, 2 H), 2.15 (s, 1 H), 2.23 (m, 3 H), 2.47 - 2.55 (m, 1 H), 4.35 (d, .7=7.62
Hz, 2 H), 7.39 (dd, J=8.79, 1.95 Hz, 1 H), 7.65 (d, J=8.79 Hz, 1 H), 7.67 (d, J=2.15
Hz, 1 H); MS (ESI) (M+H)+ 434.0; Anal. Calcd(%) for Ci9H23N3O2SF4 + 0.7 TFA; C,
47.74; H, 4.65; N, 8.19. Found: C, 47.88; H, 4.68; N, 8.19.
StepB: V-[l-[(494-Difluorocyclohexyl)methyl]-2-(l5l-difiuoroethyI)-LErbenzimidazol-
5-yl] acetamide
JV-(3-Arnino-4-{[(4,4-difluorocyclohexyl)methyl]amino}phenyl) acetamide (99 mg,
0.333 mmol), DIPEA (0.087 mL, 0.500 ramol), HATU (140 mg, 0.366mmol) and 2,2-
difluoropropionic acid (40 mg, 0.366 mmol) were stirred in 5 mL of DMF at rt for Ih.
The solvent was evaporated. The residue was dissolved in 3 mL of glacial AcOH and
heated at 80°C for 2h. The solvent was evaporated. The product was dissolved in
EtOAc and washed with aqueous NaHCOa solution, saturated aqueous NaCl solution
and dried over anhydrous Na2SO4. The product was purified by silica gel flash
chromatography using EtOAc as eluent Yield: 100 mg (81%). !H NMR (400 MHz,
CHLOROFORM-D) 5 1.39 - 1.52 (m, 2 H), 1.57 - 1.63 (m, 1 H), 1.64 - 1.71 (m, 3 H),
2.06 - 2.16 (m, 3 H), 2.22 (s, 3 H), 2.29 (m, 3 H), 4.25 (d, .7=7.42 Hz, 2 H), 7.31 (s, 1
H),7.35 (d,.7=8.79 Hz, 1 H),7.60(dd, J=8.89,1.86 Hz, 1 H), 7.86 (d, J=l.76 Hz, 1
jV-[l-[(4,4-Difluorocyclohexyl)methyl]-2-(l,l-difluoroethyl)-lflr-benzimidazoI-5-
yljethanesulfonamide
7-[l-[(4,4-Difluorocyclohexyl)methyl]-2-(l,l-difluoroetliyl)-lf-ben2imidazol-5-
yljacetamide (80 nag, 0.215 mmol) was heated in 5 niL of 1:1 / 2M HC1: EtOH at
120°C for Ih using a Personal Chemistry microwaves instrument. The solvent was
evaporated. The residue was basified with 2M NaOH and extracted (3X) with
EtOAc. The organic phase was washed with saturated aqueous NaCl solution and
dried over anhydrous Na2S64. The solvent was evaporated. The product was
dissolved in 5 niL of DCM containing DMAP (31 rag, 0.256 mmol) and
etllanesulfonyl chloride (0.026 mL, 0.280 mmol) was added. The solution was stirred
at rt for 2h. The solution was washed with saturated aqueous NaHCOs solution, brine
and dried over anhydrous MgSC4. The solvent was evaporated and the product
purified by reversed-phase HPLC using 10-70% CHaCN/EbO and lyophilized
affording the title compound as the corresponding TFA salt. Yield: 22 mg (19%). *H
NMR (400 MHz, METHANOL-D4) 5 1.29 (t, .7=7.42 Hz, 3 H), 1.36 -1.49 (m, 2 H),
1.58 -1.66 (m, 3 H), 1.67 -1.78 (m, 1 H), 1.96 - 2.06 (m, 2 H), 2.11 - 2.15 (m, 1 H),
2.21 (m, 3 H), 3.04 (m, 2 H), 4.33 (d, J=7.62 Hz, 2 H), 7.34 (dd, /=8.98,1.95 Hz, 1
H), 7.64 (dd, .7=5.47, 3.32 Hz, 2 H); MS (ESI) (M+H)+421.9; Anal. Calcd(%) for
Ci8H23N3O2SF4 + 0.8 TFA + 0.1 H2O: C, 45.76; H, 4.70; N, 8.17. Found: C, 45.73;
H, 4.52; N, 7.80.
Example 20
A'-[l-[(4,4-Difluorocyclohexyl)methyl]-2-(l,l-difluoroethyl)-L9r-benzimidazol-5-
yl]-2-methylpropane-2-sulfonamide
7V-[l-[(4,4-Difluorocyclohexyl)methyl]-2-(l}l-difIuoroethyl)-l^:-ben2itnidazol-5-
yljacetamide (185 mg, 0.498 mmol) was heated in 5 mL of 1:1 / 2M HC1: EtOH at
I20°C for Ih using a Personal Chemistry microwaves instrument The solvent was
evaporated. The residue was basified with 2M NaOH and extracted (3X) with
EtOAc. The organic phase was washed with saturated aqueous NaCl solution and
dried over anhydrous NazSO. The solvent was evaporated. The residue was
dissolved in 5 mL of DCM and t-butylsulfinyl chloride (0.075 mL, 0.598 mmol) and
DMAP (25 mg, 0.49 S mmol) were added. The solution was stirred at it for Ih. The
solution was washed with saturated aqueous NaHCOs solution, brine and dried over
anhydrous MgSCv 3-Chloroperoxybenzoic acid (225 mg, 0.996 mmol) was added
and the solution was stirred at rt for 4h. The solution washed with saturated aqueous
NaHCOs solution, brine and dried over anhydrous MgSO4. The product was purified
by reversed-phase HPLC using 10-70% CHsCN/HaO and lyophilized affording the
title compound as the corresponding TFA salt. Yield: 70 mg (25%). 1H NMR (400
MHz, METHANOL-D4) 5 1.33 (s, 9 H), 1.37 - 1.49 (m, 2 H), 1.60 -1.65 (m, 3 H),
1.68 -1.78 (m, 1 H), 1.97 - 2.06 (m, 2 H), 2.11 - 2.14 (m, 1 H),2.21 (m, 3 H),4.32 (d,
7=7.62 Hz, 2 H), 7.40 (dd, 7=8.89,2.05 Hz, 1 H), 7.59 (d, /=8.79 Hz, 1 H), 7.70 (d,
J=1.95 Hz, 1 H); MS (ESI) (M+H)+449.8.
Example 21
JV-[2-(l,l-Bifluoroethyl)4-(tetrahydro-2H-pyran-4-yImethyI)-18r--benzimidazol-
5-yIJ -JV-methyleth anesulfbnamide
StepA.7V-[2-(l,l-difluoroethyl)-l-(tetrahydro-2J7-pyran-4-ylmethyl)-lflbenzimidazol-
S-ylJ-N-methylethanesulfonamide
Ethanesulfonyl chloride (55 u.L, 0.58 mmol) was added to a solution of 2-(l,ldifluoroethyl)-
JV-methyl-1 -(tetrahydro-2#-pyran-4-ylmethyl)- l#-benzimidazol-5-
amine (150 mg, 0.48 mmol) and DMAP (71 mg, 0.58 mmol) in DCM (15 raL) at
ambient temperature. The reaction mixture was stirred overnight and the solvent was
concentrated. The product was purified by reverse-phase preparative HPLC using
MeCN 10 to 90% gradient in water to provide the TFA salt of the title compound as
white solid. Yield: 70 mg (28%); 'HNMR (400 MHz, CD3OD) 5 1.24 -1.37 (m, 3
H), 1.36 -1.53 (m, 4 H), 2.12 - 2.32 (m, 3 H), 3.05 - 3.17 (m, 2 H), 3.25 - 3.31 (m, 2
H), 3.33 (d} J=3.71 Hz, 1 H), 3.36 (s, 2 H), 3.89 (m, 2 H), 4.33 (d, J=7.42 Hz, 2 H),
7.49 (dd, J=S.79,1.95 Hz, 1 H), 7.69 (d, J=8.98 Hz, 1 H), 7.77 (d, J=1.76 Hz, 1 H);
MS (ESI) (M+H)+ 402.0;
Step B. A"-{5-[Acetyl(methyl)arainoJ-2-[(tetrahydro-2JBT-pyran-4-
ylmethyl)amino]phenyI}-2,2-difluoropropanamide
HATU (1.44 g, 3.78 mmol) and W-{3-ajnino-4-[(tetrahydro-2#-pyran-4-
ylmethyl)amino]phenyl}-JV-methylacetamide (1.00 g, 3.60 mrnol) (for preparation,
see Example 1, steps B to E) were added to a solution of 2,2-difluoropropanoic acid
(0.40 g, 3.60 mmol) and DIPEA (0.75 mL, 4.32 mmol) in DMF (100 mL) at room
temperature. The reaction mixture was stirred overnight. The solvent was
concentrated and the crude product was recovered in EtOAc. The organic was washed
with water, saturated NaHCOs solution and brine. The organic layer was dried over
anhydrous Na2SC4 and filtered. The solvent was concentrated giving the title
compound that was used for the next step without further purification. Yield: 1.00,
(75%); MS (ESI) (M+H)+: 370.2.
StepC. JV-[2-(l,l-Difluoroethyl)-l-(tetrahydro-2fl-pyran-4-ylmethyl)-lJTbenzimidazol-
7V"-{5-[Acetyl(memyl)ammo]-2-[(tetrahydro-2^-pyran-4-ylmethyl)amino]phenyl}-
2,2-difluoropropanamide (1.00 g, 2.70 mmol) was heated to 90°C overnight in acetic
acid (20 mL). The solvent was concentrated. The crude product was purified by flash
chromatography on silica gel, using MeOH 3.5% and acetone 8% in DCM as eluent,
giving the title compound. Yield: 0.48 g (50%); MS (ESI) (M+Hf: 352.0.
Step D. 2-(l,l-difluoroethyl)-A'r-methyl-l-(tetrahydro-2J5r-pyran^-ylmethyl)-15rb
enzimidazol-5-amine
O—/ 0-
N-[2-(l, I -Difluoroethyl)-1 -(tetrahydro-2F-pyran-4-ylmethyl)- !J?-benzimidazol-5-yl]-
yV-methylacetamide (0.48 g, 1.37 mmol) was heated to 80°C overnight in concentrated
HCI (80 mL). The reaction mixture was cool to 0°C and brought to slightly basic pH
using NaOH solution. The compound was extracted with EtOAc (3X) and the
combined organic layers were washed with brine, dried over anhydrous NaaSC and
filtered. The solvent was concentrated giving the title compound that was used for the
next step without further purification. Yield: 0.42 g (98%); MS (ESI) (M+H)+: 310.2.
Ar-[2-l,l-DifluoroethyI)-l-(tetrahydro-2J9r-pyran-4-yImethyl)-lJ3r-benzimidazol-
5-yI]-JV-methyIpropane-l-sulfonamide
Following the procedure of step A in example 21 and using propanesulfonyl chloride
(65 uL, 0.58 mmol) provided the TFA salt of the title compound as a white solid.
Yield: 68 mg (26%); 1E NMR (400 MHz, CD3OD) 8 1.02 (t, J=7.42 Hz, 3 H), 1.40 -
1.54 (m, 4 H), 1.74 -1.87 (m, 1 H), 2.17 - 2.34 (m, 3 H), 3.05 - 3.15 (m, 2 H), 3.32 -
3.37 (m, 2 H), 3.37 (s, 3 H), 3.85 - 3.97 (m, 2 H),4.35 (d, J-7.62 Hz, 2 H), 7.50 (dd,
1=8.89, 2.05 Hz, 1 H), 7.71 (d, J=8.79 Hz, 1 H), 7.78 (d, J=1.95 Hz, 1 H); MS (ESI)
(M+H)+416.0; Anal. Calcd for QgHaTFaNsCS + 0.1 MeCN: C, 54.96; H, 6.56; N,
10.35. Found: C, 55.02; H, 6.40; N, 10.24.
Following the procedure of step A in example 21 using cyclopropanesulfonyl chloride
(81 uL, 0.58 mmol) and lieating to 60°C overnight, provided the TFA salt of the title
compound as a white solid. Yield: 135 mg (52%); !H NMR (400 MHz, CD3OD) 8
0.85 - 0.93 (m, 2 H), 0.93 - 1.03 (m, 2 H), 1.39 - 1.55 (m, 4 H), 2.24 (m, 3 H), 2.55 -
2.66 (m, 1 H), 3.31 - 3.38 (m, 3 H), 3.39 (s, 3 H), 3.86 - 3.97 (m, 2 H), 4.36 (d, J=7.42
Hz, 2 H), 7.52 (dd, 1=8.79,2.15 Hz, 1 H), 7.70 (d, J-8.79 Hz, 1 H), 7.81 (d, J=2.15
Hz, 1 H); MS (ESI) (M+H)+414.0; Anal. Calcd for CiaHaF^NaOsS + 0.1 H2O: C,
54.95; H, 6.12; N, 10.12. Found: C, 54.91; H, 6.09; N, 9.68.
2-fe7-Butyl-l-[(4-fluorocyclohexyl)methyl]-lH--benziinidazol-5-aniine(for
preparation see following steps B to F) (60 mg, 0.198 mmol) and DMAP (24 nag,
0.198 mmol) were dissolved in 5 mL of DCM. Ethanesulfonyl chloride (0.025 mL,
0.257 mmol) was added and the solution was stirred at rt for 2h. The solution was
washed with saturated aqueous NaHCOs solution, brine and dried over anhydrous
MgSC4. The solvent was evaporated and the product was purified by reversed-phase
HPLC using 10-70% CH3CN/H20 and lyophilized affording the title compound as the
corresponding TFA salt. Yield: 50 mg (50%). !H NMR (400 MHz, METHANOLD4)
6 1.29 (t, .7=7.42 Hz, 3 H), 1.34 -1.41 (m, 2 H), 1.43 -1.51 (m, 1 H), 1.53 -1.62
(m, 1 H), 1.63 - 1.66 (rn, 9 H), 1.69 -1.75 (m, 2 H), 1.96 - 2.04 (m, 1 H), 2.06 - 2.12
(m, 2 H), 3.12 (q, /=7.42 Hz, 2 H), 4.44 - 4.49 (m, 2 H), 7.39 (dd, J=9.08,2.05 Hz, 1
H), 7.73 (d, J=2.15 Hz, 1 H), 7.85 (d, J=9.18 Hz, 0.7 H)3 7.85 - 7.88 (d, J=9.1SHz,
0.3H); MS (ESI) (M+H)+396.0; Anal. Calcd(%) for C2oH3oN302SF + 1.3 TFA + 0.5
H20: C, 49.11; H, 5.89; N, 7.60. Found: C, 49.10; H, 5,84; N, 7.52.
Step B: ferf-Butyl [(4-fluorocyclohex-3-en-l~yl)methyI]carbamate
4-N-Boc-aminomethyl cyclohexanone (4.95g, 21.8 rnmol) was dissolved in 80 mL of
THF. DAST (4.3 mL, 32.7 mmol) was added dropwise and the solution was stirred at
50°C for 5h. The solvent was concentrated and the product purified by silica gel flash
chromatography using 3:1 / hexanestEtOAc as eluent Yield: 1.62 g (30%). :HNMR
(400 MHz, CHLOROFORM-D) 6 1.36 -1.42 (m, 1 H), 1.44 (s, 9 H), 1.70 -1.80 (m,
2 H), 1.82 - 1.90 (m, 1 H), 2.09 - 2.17 (m, 1 H), 2.17 - 2.29 (m, 2 H), 3.04 - 3.11 (m, 2
H), 4.61 (s, 1 H), 5.11 - 5.15 (m, 0.5 H), 5.16 - 5.19 (m, 0.5 H).
Step C: [(4-Fluorocyclohex-3-en-l-yI)methylIamine hydrochloride
tert-Butyl [(4-fluorocyclohex-3-en-l-yl)rnethyl]carbaraate (1.62g, 7.06 mmol) was
stirred in 25 mL of IM HCl/AcOH at rt for 2h. The solvent was evaporated and the
product was precipitated in ether, filtered and dried tinder vacuum. Yield: 1.13g
(97%). 'H NMR (400 MHz, METHANOL-D4) 5 1.44 - 1.53 (m, 1 H), 1.80 - 1.89 (m,
2 H), 1.90 - 1.98 (m, 1 H), 2.16 - 2.23 (m, 2 H), 2.26 - 2.34 (m, 1 H), 2.88 (d, .7=6.25
Hz,2H),5.12-5.19(m, 1H).
Step C: 7V-(4-{[(4-Fluorocyclohex-3-en-l-yl)methyI]amino}-3-
nitrophenyl)acetaraide
Af-(4-Huoro-3-nitrophenyl)acetamide (460 mg, 2.32 mmol) and [(4-fluorocyclohex-3-
en-l-yl)methyl]amine hydrochloride (350 mg, 2.11 mmol) were stirred in 20 mL of
EtOH containing TEA (0.735 mL, 5.28 mmol) at 75°C for 48h. The solvent was
concentrated. The residue was dissolved in EtOAc and washed with aqueous 5%
KHSO4, saturated aqueous NaHCOs solution, brine and dried over anhydrous MgSCU.
The crude product was purified by silica gel flash chromatography using 2:1 /
hexanes:acetone as eluent. Yield: 553 mg (85%). !H NMR (400 MHz,
CHLOROFORM-D) 8 1.51 -1.61 (m, 1 H), 1.84 - 1.93 (m, 1 H), 1.96 - 2.03 (m, 2 H),
2.16 - 2.18 (m, 3 H), 2.22 - 2.32 (m, 3 H), 3.26 (m, 2 H): 5.19 (m, 1 H), 6.84 (d,
J=9.37 Hz, 1 H), 7.21 (s, 1 H), 7.79 (dd, J=9.1S, 2.54 Hz, 1 H), 8.09 (d, J=2.54 Hz, 2
H).
StepD: 7y-(3-Amino-4-{[(4-jQuorocyclohexyl)methyl]ammo}phenyI)acetainide
Ar-(4-{[(4-Fluorocyclohex-3-en-l-yl)methyl]amino}-3-nitrophenyl)acetamide
(340mg, 1.11 mmol) was dissolved in 25 mL of EtOAc containing a catalytic amount
of 10% Pd/C. The solution was shaken under E2 atmosphere (40 psi) using a Parr
hydrogenation apparatus at rt for 48h. The solution was filtered through celite and the
solvent was evaporated. Yield: 308mg (99%). MS (ESI) (M+H)* 279.95,
StepE: Ar-{2-/er/-Butyl-l-[(4-fluorocyclohexyl)methyl]-lJH-benziiuidazol-5-
yljacetamide
Ar-(3-Amino-4-{[(4-fluorocyclohexyl)rnethyl]arnino}phenyl)acetamide (300 mg, 1.07
mmol) andDMAP (25 mg, 0.214 mmol) were dissolved in 10 mL of DCM.
Trimethylacetyl chloride (0.145 mL, 1.18 mmol) was added dropwise and the solution
was stirred at rt for Ih. The solution was washed with aqueous NaHCOa solution,
brine and dried over anhydrous MgSC4. The residue was dissolved in 5 mL of AcOH
and was heated at 150°C for 2.5h using a Personal Chemistry microwave apparatus.
The solvent was evaporated. The residue was dissolved in EtOAc and washed with
aqueous NaHCOa solution, brine and dried over anhydrous MgSO4. The crude
product was purified by silica gel flash chromatography using 2:1 / acetone:hexanes
as eluent. Yield: 196 mg (53%). 'HTHMR (400 MHz, CHLOROFORM-D) 81.14 -
1.25 (m, 2 H), 1.37 -1.45 (m, 1 H), 1.43 -1.51 (m, 1 H), 1.54 - 1.57 (m, 9 H), 1.70 -
1.78 (m, 2 H), 1.70 - 1.77 (m, 1 H), 2.02 - 2.08 (m, 1 H), 2.10 - 2.17 (m, 1 H), 2.19 -
2.21 (m, 3 H), 4.12 - 4.19 (m, 2 H), 4.53 (m, 0.3 H), 4.73 (m, 0.3 H), 4.78 (m, 0.2 H),
4.90 (m, 0.2 H), 7.21 - 7.29 (m, 1 H), 7.30 (s, 1 H), 7.50 - 7.57 (m, 1 H), 7.64 - 7.67
(m, 1 H).
StepF: 2-terf-Butyl-l-[(4-fluorocyclohexyl)methyl]-U9r-ben2imidazol-5-amine
N- {2-t er/-Butyl- l-[(4-fluorocyclohexyl)methyl]-llf-ben2:imidazol-5-yl} acetamide
(190 mg, 0.550 mmol) was heated in 5 mL of 1:1 / 2M HC1: EtOH at 120°C for Ih
using a Personal Chemistry microwaves apparatus. The solvent was evaporated. The
residue was basified with 2M NaOH and extracted (3X) with EtOAc. The organic
phase was washed with saturated aqueous NaCl solution and dried over anhydrous
Na2SO4. The solvent was evaporated. Yield: 154 mg (92%). *H NMR (400 MHz,
METHANOL-D4) 6 1.28 -1.39 (m, 2 H), 1.41 -1.50 (m, 1 H), 1.53 -1.59 (m, 1 H),
1.61 - 1.64 (m, 9 H), 1.69 (d, 7=7.81 Hz, 2 H), 1.95 -2.03 (m, 0.7 H), 2.05 - 2.11 (m,
2 H), 2.13 - 2.22 (m, 0.3 H), 4.37 - 4.44 (m, 2.7 H), 4.47 - 4.56 (m, 0.3 H), 7.11 (t,
7=2.05 Hz, 0.5 H,) 7.13 (t, 7=2.05 Hz, 0.5 H), 7.15 - 7.18 (m, 1 H), 7.67 - 7.73 (m, 1
7V-{2--/-Buryl-l-[(4-fluorocyclohexyl)methyl]-lH:-benziniidazol-5-
yl}cyclopropanesulfonamide
2-fe;t-But-l-[(4-fluorocyclohexyl)methyl]-lH-benzimidazol-5-airiine (56 mg, 0.199
inmol) and DMAP (25 mg, 0.199 inmol) were dissolved in 5 mL of DCM.
Cyclopropanesulfonyl chloride (42 mg, 0.298 mmol) was added and the solution was
stirred at rt for 31i. The solution was washed with saturated aqueous NaHCOs
solution, brine and dried over anhydrous MgSCV The solvent was evaporated and the
product was purified by reversed-phase HPLC using 10-70% CHsCN/BbO and
lyophilized affording the title compound as the corresponding TFA salt Yield: 58 mg
2 H), 1.32 - 1.43 (m, 2 H), 1.45 - 1.52 (m, 1 H), 1.54 - 1.62 (m, 1 H), 1.64 - 1.67 (m, 9
H), 1.68 - 1.76 (m, 1 H), 1.97 - 2.05 (m, 1 H), 2.06 - 2.13 (m, 2 H), 2.54 - 2.62 (m, 1
H), 4.44 - 4.50 (m, 2 H), 4.53 (m, 0.5 H), 4.73 (m, 0.5 H), 7.43 (dd, J=9.08, 2.05 Hz,
1 H), 7.75 (d, J=1.95 Hz, 1 H), 7.83 - 7.89 (m, 1 H); MS (ESI) (M+H)+ 408.0.
Example 26
Ar-{2-tert-ButyH-[(4-fluorocyclohexyl)methyl]-lH'-benzimidazol-5-yl}-2-
methylpr op ane-2-sulfonamide
2-te? Butyl-l-[(4-fluorocyclohexyl)methyl]-lF-benzimidazol-5-amine (53 mg, 0.175
mmol) and DMAP (21 mg, 0.175 mmol) were dissolved in 5 mL of DCM. t-
Butylsulfmyl chloride (0.026 mL, 0.210 mmol) was added and the solution was
stirred at rt for Ih. The solution was washed with saturated aqueous NaHCO3
solution, brine and dried over anhydrous MgSO, 3-Chloroperoxybenzoic acid (78
mg, 0.350 mmol) was added and the solution was stirred at rt for 2h. The solution
washed with saturated aqueous NaHCOs solution., brine and dried over anhydrous
MgS04. The product was purified by reversed-phase HPLC using 10-70%
CH3CN/H2O and lyophilized affording the title compound as the corresponding TFA
salt. Yield: 47 mg (50%). 5H NMR (400 MHz, METHANOL-D4) 5 1.36 (s, 9 H),
1.38 -1.44 (m, 2 H), 1.44 -1.51 (m, 1 H), 1.54 - 1.60 (m, 1 H)31.63 -1.66 (m, 9 H),
1.69 -1.75 (m, 2 H), 1.96 - 2.04 (m, 1 H), 2.06 - 2.14 (m, 2 H), 4.42 - 4.48 (m, 2 H),
4.53 (m, 0.5 H), 4.72 (m, 0.5 H), 7.42 (dd, .7=8.98,2.15 Hz, 1 H), 7.79 - 7.86 (m, 2
H); MS (ESI) (M+H)+424.0.
Example 27 JV-{2-tert-but5'l-l-[(4,4-difluorocyclohexyl)methyl]-lH-benzimidazol-
5-yl} ethanesulfonamide
O
Step A. Ar-{2-/ert-butyl-l-[(4,4-difluorocyclohexyl)methyI]-LH-benzimidazol-5-
yl} ethanesulfonamide
A/"-{2-{[(434-difluorocyclohexyl)methyl]ammo}-5-[(ethylsTilfonyl)amino]phenyI}-2,2-
dimethylpropanamide (22.3 g, 0.051 mol) (for preparation, see the following steps B
to E), PTSAH20 (10.8 g, 0.057 mol) and DMSO (100 mL) were mixed together and
heated to 120°C overnight. The room temperature cooled down reaction mixture was
poured in cold water (600 mL). The product was extracted with. DCM (5 x 200 mL).
The combined organic phases were washed with NaHCOs saturated solution (4 x 200
mL), brine and dried over anhydrous Na2SCU. The solvent was removed and the crude
product was purified on silica gel (EtOAc:hexane 1:1) by flash chromatography (and
treated with activated charcoal) to provide JV-{2-ter/f-butyl-l-[(4,4-
difluorocyclohexyl)methyl]-l//-benzimidazol-5-yl}etlianesulfonamide (18.4 g) as
white solid.
EtS02Cl (21.5 mL, 0.22 mol) was added drop wise to a mixture of 4-fluoro-3-
nitroaniline (29.6 g, 0.19 mol) andpyridine (100 mL) at 0°C. The reaction mixture
was allowed to warm to room temperature and stirred overnight. The reaction mixture
was diluted with EtOAc (1 L). The resulting solution was washed with HC12N (4 x
200 mL), NaHC03 saturated solution (4 x 200 mL) and water (4 x 200 rnL). The
organic phase was dried over anhydrous NaiSC and the solvent was removed to
provide the title product as beige solid (46.3 g)
Step C. ]V-(4-{[(4,4-Difluorocyclohexyl)methyI]amino}-3-
nitrophenyl)ethanesulfonamide
]V-(4-Fluoro-3-nitrophenyl)ethanesulfonamide (26 g, 0.107 mol), [(4,4-
difluorocyclohexyl)metliyl]amine (approx. 15 g), DEPEA (20 mL) and DMSO (100
mL) were mixed together and heated to 65°C overnight. Ethanolamine (5 g) was
added and the reaction mixture was stirred until complete disappearance of JV-(4-
fluoro-3-nitrophenyl)ethanesulfonamide (approx. 4-5 hrs.). The room temperature
cooled down reaction mixture was poured in cold water (900 mL). The product was
extracted with DCM (5 x 200 mL). The combined organic phases were washed with
HC12N (3 x 200 mL) and dried over anhydrous Na2S04. The solvent was removed
and the crude product was purified on silica gel by flash chromatography (this
material can be re-crystallized using a mixture of EtOAc and hexane) to provide the
title product (24.2 g) as orange solid.
Step D. JV-(3-amino-4-{[(4,4-
difluorocyclohexyl)methyl]amino}phenyl)ethaaesulfonamide
A (4-{[(4,4-Difluorocyclohexyl)memyl]aniino}-3-nitropheriyl)ethanesulfonamide
(23.4g) and Pd/C 10% in EtOAc (800 mL) were shaken together overnight under H2
atmosphere (50 PSI) in a Parr hydrogenation apparatus. The reaction mixture was
diluted with MeOH (400 mL) and filtered over celite bed. The solvent was removed
to provide the desired title product (22.2 g) as beige solid.
Step E. JV-{2-{[(4,4-difluorocyclohexyl)methylJamino}-5-
[(ethylsulfonyl)amino]phenyl}-2,2-dimethylpropanamide
A solution of t-BuCOCl (7.6 g, 0.063 mol) in DCM (150 mL) was slowly added to a
solution of Ar-(3-amino-4-{[(4,4-
difluorocyclohexyl)methyl]amino}phenyl)ethanesulfonamide (22 g, 0.063 mol) and
Et3N (9.7 mL, 0.069 mol) in DCM (500 mL) at 0°C. The reaction mixtuie was stirred
for 3 hrs. at 0°C. DCM (300 mL) and water (200 mL) were added. The organic layer
was separated and washed with water (3 x 200 mL), brine and dried over anhydrous
NaaSOA. The solvent was removed and the crude product was purified on silica gel by
flash chromatography (EtOAc:hexane 1:1) to provide the title product (23.3 g) as
beige solid.
Example 28 AL{2-to yl}ethanesulfonamide (isomers)
chiral separation
Isomers A + B
A/r-{2-fe7/-Butyl-l-[(4-fluorocyclohexyl)methyl]-lJ?;f-benzimidazol-5-
yl}ethanesulfonamide (60 mg, TFA salt, 0.117 mmol) was separated on a chiral AD
column using 10% EtOH / hexanes (0.1% diethylamine) giving respectively Isomer A
(16 mg) and Isomer B (31 mg).
Isomer A: !H NMR (400 MHz, METHANOL-D4) 5 1.30 (t, J=7A2 Hz, 3 H), 1.41 -
1.52 (m, 3 H), 1.54 -1.63 (m, 3 H), 1.65 (s, 9 H), 1.97 - 2.05 (m, 2 H), 2.15 - 2.24 (m,
1 H), 3.13 (q, .7=7.29 Hz, 2 H), 4.47 (d, J=7.62 Hz, 2 H), 4.72 (s, 0.5 H), 4.85 (s, 0.5
H), 7.38 (dd, .7=8.98, 2.15 Hz, 1 H), 7.73 (d, .7=1.95 Hz, 1 H), 7.85 (d, J=8.98 Hz, 1
H); MS (ESI) (M+H)+395.8; Chiral AD 15%EtOH/hexanes (0.1% DBA) k' = 2.97.
Isomer B: ]H NMR (400 MHz, METHANOL-D4) 6 1.30 (t, .7=7.32 Hz, 3 H), 1.34 -
1.39 (m, 2 H), 1.39 -1.45 (m, 2 H), 1.65 (s, 9 H), 1.70 -1.75 (m, 2 H), 2.06 - 2.13 (m,
3 H), 3.13 (q, J=7.42 Hz, 2 H), 4.37 - 4.43 (m, 0.5 H), 4.45 (d, J=7.62 Hz, 2 H), 4.49 -
4.56 (m, 0.5 H), 7.39 (dd, J=9.08, 2.05 Hz, 1 H), 7.73 (d, JH2.15 Hz, 1 H), 7.84 (d,
/=9.18 Hz, 1 H); MS (ESI) (M+H)+395,8; Anal. Calcd for C2oH3oN3O2SF + 1.2 TFA
+ 0.2 H2O: C, 50.20; H, 5.94; N, 7.84. Found: C, 50.13; H, 5.81; N, 7.74; Chiral AD
15%EtOH/hexanes (0.1% DBA) k' = 3.81.(Table Removed)





What is claimed is:
1. A compound of formula I, a pharmaceutically acceptable salt thereof,
diastereomers, enantiomers, or mixtures thereof:
G is selected from -O- and -CF2-;
R1 is selected from Cialkyl and Cs-ecycloalkyl;
R2 is selected from -H and methyl; and
R3, R4 and R5 are independently selected from fluoro and methyl.
2. A compound as claimed in claim 1, wherein
R1 is selected from Cialkyl and Cacycloalkyl.
3. A compound as claimed in claim 1, wherein
G is -O-;
R1 is selected from ethyl, propyl and cyclopropyl; and
R3, R4 and R5 are independently selected from fluoro and methyl with R3, R4
and R5 being the same.
4. A compound as claimed in claim 1, wherein
G is -CF2-;
R1 is selected from ethyl, propyl and cyclopropyl; and
R3, R4 and R5 are independently selected from fluoro and methyl with R3, R4
and R5 being the same.
5. A compound selected from
and pharmaceutically acceptable salts thereof.
6. A compound of formula I, a pharmaceutically acceptable salt thereof,
diastereomers, enantiomers, or mixtures thereof:
wherein
G is selected from -O-, -CHF- and -CF2-;
R1 is selected from Cialkyl and Cs-ecycloalkyl;
R2 is selected from -H and methyl; and
R3, R4 and R5 are independently selected from fluoro and methyl.
7. A compound as claimed in claim 6, wherein G is selected from -CHF- and
8. A compound as claimed in claim 6, wherein R1 is selected from ethyl, propyl,
t-butyl and cyclopropyl.
9. A compound according to any one of claims 1-8 for use as a medicament.
10. The use of a compound according to any one of claims 1-8 in the manufacture
of a medicament for the therapy of pain.
11. The use of a compound according to any one of claims 1-8 in the manufacture
of a medicament for the treatment of anxiety disorders.
12. The use of a compound according to any one of claims 1-8 in the manufacture
of a medicament for the treatment of cancer, multiple sclerosis, Parkinson's disease,
Huntington's chorea, Alzheimer's disease, gastrointestinal disorders and
cardiovascular disorders.
13. A pharmaceutical composition comprising a compound according to any one
of claims 1-8 and a pharmaceutically acceptable carrier.
14. A method for the therapy of pain in a warm-blooded animal, comprising the
step of administering to said animal in need of such therapy a therapeutically effective
amount of a compound according to any one of claims 1-8.
15. A method for preparing a compound of Formula I, comprising:
reacting a compound of Formula II with a compound of formula III,
G is selected from -O-, -CHF- and -CF2-;
R1 is selected from Cialkyl and Cs-gcycloalkyl;
R2 is selected from -H and methyl; and
R3, R4 and R5 are independently selected from fluoro and methyl.
16. Compounds selected from the group consisiting of
7V-(4-{[(4,4-difluorocyclohexyl)methyl]amino}-3-nitrophenyl)ethanesulfonamide,
A-(3-amino-4-{[(4,4-difluorocyclohexyl)methyl]amino}phenyl)ethanesulfonamide, and
N- {2- {[(4,4-difluorocyclohexyl)methyl] amino} -5 - [(ethylsulfonyl)amino]phenyl} -
dimethylpropanamide
17. Use of compounds according to claim 16 as intermediates in the preparation of the
compound of formula I.


Documents:

1632-delnp-2007-Abstract-(01-07-2013).pdf

1632-delnp-2007-Abstract-(04-07-2013).pdf

1632-delnp-2007-abstract.pdf

1632-delnp-2007-Claims-(01-07-2013).pdf

1632-delnp-2007-Claims-(04-07-2013).pdf

1632-delnp-2007-claims.pdf

1632-delnp-2007-Correspondence-Others-(01-07-2013).pdf

1632-delnp-2007-Correspondence-Others-(04-07-2013).pdf

1632-DELNP-2007-Correspondence-Others.pdf

1632-delnp-2007-description (complete).pdf

1632-DELNP-2007-Form-1.pdf

1632-delnp-2007-Form-18-(19-09-2008).pdf

1632-delnp-2007-Form-2-(01-07-2013).pdf

1632-delnp-2007-Form-2-(04-07-2013).pdf

1632-delnp-2007-form-2.pdf

1632-delnp-2007-Form-3-(01-07-2013).pdf

1632-delnp-2007-Form-3-(04-07-2013).pdf

1632-delnp-2007-form-3.pdf

1632-delnp-2007-form-5.pdf

1632-delnp-2007-GPA-(01-07-2013).pdf

1632-delnp-2007-GPA-(04-07-2013).pdf

1632-delnp-2007-gpa.pdf

1632-delnp-2007-pct-210.pdf

1632-delnp-2007-pct-notification.pdf

1632-delnp-2007-Petition-137-(01-07-2013).pdf

1632-delnp-2007-Petition-137-(04-07-2013).pdf

abstract.jpg


Patent Number 258294
Indian Patent Application Number 1632/DELNP/2007
PG Journal Number 01/2014
Publication Date 03-Jan-2014
Grant Date 27-Dec-2013
Date of Filing 28-Feb-2007
Name of Patentee ASTRAZENECA AB,
Applicant Address S-151 85 SODERTALJE,SWEDEN,
Inventors:
# Inventor's Name Inventor's Address
1 DANIEL PAGE, ZIPING LIU, MAXIME TREMBLAY, HUA YANG ASTRAZENECA R & D MONTREAL, 7171 FREDERICK-BANTING,ST. LAURENT,QUEBEC H4S 1Z9, CANADA.
2 CHRISTOPHER WALPOLE ASTRAZENECA R & D MONTREAL, 7171 FREDERICK-BANTING, ST. LAURENT, QUEBEC H4S 1Z9, CANADA.
3 DANIEL PAGE, ZIPING LIU, MAXIME TREMBLAY, HUA YANG ASTRAZENECA R & D MONTREAL, 7171 FREDERICK-BANTING,ST. LAURENT,QUEBEC H4S 1Z9, CANADA.
4 CHRISTOPHER WALPOLE ASTRAZENECA R & D MONTREAL, 7171 FREDERICK-BANTING, ST. LAURENT, QUEBEC H4S 1Z9, CANADA.
PCT International Classification Number CO7D 405/06
PCT International Application Number PCT/SE2005/001403
PCT International Filing date 2005-09-22
PCT Conventions:
# PCT Application Number Date of Convention Priority Country
1 PCT/GB04/004124 2004-09-24 U.K.
2 60/640,306 2004-12-30 U.K.