Indian Patents. 255854:METHODS FOR HIGH EFFICIENCY TRANSFORMATION AND REGENERATION OF PLANT SUSPENSION CULTURES

Title of Invention	METHODS FOR HIGH EFFICIENCY TRANSFORMATION AND REGENERATION OF PLANT SUSPENSION CULTURES
Abstract	The present invention provides methods for high efficiency plant transformation via Agrobacterium-mediated T-DNA conjugation to suspension-cultured cells or calli. The methods described herein employ membranes of filters as porous solid support for the co-culture of T-DNA donor and recipient.

Full Text	1 METHODS FOR HIGH EFFICIENCY TRANSFORMATION AND REGENERATION OF PLANT SUSPENSION CULTURES FIELD OF THE INVENTION The present invention relates generally to genetic engineering of plants, and, more particularly, to methods of Agrobacterium-tnediated trans formation. BACKGROUND OF THE INVENTION Throughout this application, various patents, published patent applications and publications are referenced. Disclosures of these patents, published patent applications and publications in their entireties are hereby incorporated by reference into this application to more fully describe the state of the art to which this invention pertains. Full bibliographic citations for the publications may be found listed in the Bibliography immediately preceding the claims. Cotton is an economically important crop. Annual cotton fiber production contributes billions of U.S. dollars to the world=s agricultural economy. While gene transformation of cotton has been possible since 1987 (Firoozabady et al., 1987), the methods used today remain very inefficient and costly due to unusually low rates of plant regeneration from the transformed cells, and low flower fertility. The lengthy regeneration process adds a further drag to the efficiency. Several methods have been available for Agrobacterium-mediated transformation of a variety of cotton explants, such as cotyledons (Firoozabady et al., 1987), hypocotyls (Umbeck et al., 1987; U.S. Pat. No. 5,004,863 and 5,159,135; European patent publication "EP" 0 270 355), petiole (PCT publication WO 00/77230 Al) and root (PCT Pub. WO 00/53783). Improved methods for cotton plant regeneration and transformation have been reported using hypocotyl transition zones (WO 98/15622), shoot apices (WO 89/12102 and U.S. Pat No. 5,164,310) and apical or nodal meristematic tissues (WO 97/43430). Alternatively, cotton explants can be transformed by microprojectile bombardment, for example, embryonic axes (WO 92/15675 and EP 0 531 506; McCabe and MartineU, 1993) and embryogenic suspension cultures (Finer and Me Mullen, 1990). Most methods cited above employ a regeneration path of somatic embryogenesis, which requires a lengthy process of initiation, maturation and germination. Transformation of somatic embryogenic callus tissues or embryogenic suspension cultures, either via Agrobacterium-vaedidted transformation (U.S. Patent No. 6,483,013; U.S. Patent No. 5,583,036) or particle bombardment (Finer and Me Mullen, 1990), has substantially shortened the regeneration process. Nevertheless, transformation remains severely hampered by the unusually low conversion rate of somatic embryos to normal rooted plantlets. 2 Apart from regeneration, more efficient methods for delivering T-DNA into the host genome have been sought in connection with transformation of plants such as cotton. Extensive investigations have been undertaken in the understanding o£ Agrobacterium virulence and T-DNA conjugation. Today, it is well understood that before T-DNA can be delivered into the plant cells, Agrobacterium cells must recognize and attach themselves to the host cells through complex signaling mechanisms mediated by chemical factors secreted by the host, the production of which is induced by mechanical wounding. These chemical factors consist of a variety of phenolic compounds such as acetosyringone, sinapinic acid (3,5 dimethoxy-4-hydroxycinnamic acid), syringic acid (4-hydroxy-3,5 dimethoxybeozoic acid), ferulic acid (4-hydroxy-3-methoxycinnamic acid), catechol (1,2-dihydroxybenzene), p-hydroxybenzoic acid (4-hydroxybenzoic acid), /3-resorcylic acid (2,4 dihydroxybenzoic acid), protocatechuic acid (3,4-dihydroxybenzoic acid), pyrrogallic acid (2,3,4-trihydroxybenzoic acid), gallic acid (3,4,5-trihydroxybenzoic acid) and vanillin (3-methoxy-4-hydroxybenzaldeh)'de) (U.S. Pat No. 6,483,013). A constitutively expressed wG mutant protein (virGN54D) has been found to enhance Agrobacterium virulence and transformation efficiency. (Hansen et al, 1994). Similarly, chemical compounds, such as acetosyringone or nopaline, that stimulate Agrobacterium virulence, markedly increased transformation efficiency of cotton shoot tips (Veluthambi et al., 1989) and somatic embryogenic callus that was propagated on solid media (U.S. Pat. No. 6,483,013). An example is the successful transformation of a large number of fungi, which are unable to secrete Agrobacterium virulence inducing compounds, making acetosyringone indispensable for T-DNA conjugation (Bundock et al., 1995; de Groot et aL, 1998). Despite the many past efforts and attempts to improve transformation methods, the techniques used to date remain unproductive, time-consuming and costly. Consequently, some plants, such as cotton, fall a long way behind other major crops in the understanding of molecular mechanisms of plant development and tissue differentiation. Clearly, the current transformation techniques are inconsistent with the economic importance of cotton in particular, and a breakthrough is long overdue. In the majority of plants, including cotton, transformation methods primarily exploit Agrobacterium to deliver T-DNA into host cells that are confined to a small surface area, i.e., the cut surface of explants or callus (U.S. Pat. No. 6,483,013). This greatly limits the incidence of gene transformation as the majority of host cells are not in direct contact with the T-DNA donor. As a 3 result, only about 20-30% of explants are transformed (Firoozababy et al., 1987; Cousins et al., 1991). Previously, cell suspension cultures have been successfully transformed using a co-culture regime that was based on liquid medium in a AT-tube@ or in a flask (U.S. Pat 5,583,036). While no detailed rate of transformation was shown, we found the method has a similarly low transformation efficiency (Fig. 14). A major problem in the method could be the low T-DNA conjugation efficiency when co-culture was performed in rich liquid medium in which Agrobacterium cells may have difficulty expressing virulence genes and attaching to the plant cells that were put under constant agitation. In contrast to explants that have been used predominantly for transformation of plants, cells in suspension cultures are present as a single cell or a small clump of cells. Currently, an efficient technique to handle and transform these materials is lacking. Recent studies have suggested that fungal cells cultured in liquid medium can be transformed when co-culture is performed on porous membranes that were laid atop semi-solid medium that had been optimized for Agrobacterium virulence (PCT Pub. WO 02/00896; Bundock et al., 1995; Piers et al., 1996; de Groot et al., 1998). The use of membranes or filters has a twofold advantage. It effectively filters out excessive liquid mat has been carried over, collecting the T-DNA recipient and donor cells while allowing efficient diffusion of nutrients, minerals and signaling compounds between the co-culture and medium. Finer (1988; European Pat. 0317512 Bl) initiated embryogenesis in low auxin-containing liquid medium (MS salts, B5 Vitamins, 0,1 mg/1 2,4-D or 0.5 mg/1 picloram, 2% sucrose) using undifferentiated calli derived from cotyledon or hypocotyl explants. The embryogenic tissues were then proliferated/maintained in similar liquid medium with a higher auxin content (5 mg/1 2,4-D). The suspension tissues thus prepared may develop into mature embryos in liquid medium if glutamine is present Rangan et al (U.S. Pat. Nos. 5,583,036 and 5,244,802) initiated somatic embryo formation in high auxin solid medium (1-10 mg/1) and maintained the embryogenic callus in high auxin (1-10 mg/1) liquid medium using differentiated callus derived from cotyledon, hypocotyl explants or zygotic embryos produced on solid medium. The culture contained a mixture of embryogenic cell clumps of various sizes and needed to be filtered regularly to remove larger clumps. Trolinder and Goodin (1987) initiated embryogenesis in hormone-free liquid medium and maintained the suspension cultures in the same medium. Cells in this type of suspension culture 4 have heterologous developmental stages and are present as large clumps that secrete darkening, growth-inhibiting compounds. Levee, et al., (1999), and U.S. Pat Application Publication Nos. US2002/0100083 Al, US2002/0083495 Al, and US2002/0092037 Al refer to the use of membranes in the co-culture of pine cells. There remains a need in the art for improved and more efficient methods of Agrobacterium-mediated transformation and regeneration ofplants, such as cotton, maize, soybean, wheat, rice, and barley. SUMMARY OF THE INVENTION To overcome the problems associated with previously reported methods of plant (particularly cotton) transformation, the present invention provides methods for high efficiency plant transformation via Agrobacterium-mediatcd T-DNA conjugation to suspension-cultured cells or calti. The methods described herein employ membranes or filters as solid support for co-culture of T-DNA donor and recipient In particular, the present invention provides a method for producing a transgenic plant, which comprises providing aproembryogenic plant cell and culturing the cell in a liquid medium to produce a cell suspension culture. The suspension culture is co-cultured, on a porous solid support, with a culture of Agrobacterium tumefaciens that harbors a vector comprising an exogenous gene and a selectable marker,, the Agrobacterium being capable of effecting the stable transfer of the exogenous gene and selectable marker to the genome of the cell. A population of cells is thereby generated and those expressing the exogenous gene are selected and regenerated into transgenic plants. In one aspect, using Green Floresosnt Protein (GFP) as a visual marker, it was discovered that cotton cell cultures could be transformed at surprisingly high efficiency (up to 200 kanamycin-resistaat callus forming units per 200 mg cell mass) and could be regenerated into fertile plants at a much higher efficiency than previously reported. In another aspect of the invention, previously unexplored tissues, such as cotton root or shoot tips dissected from mature seeds, are used for initiation and maintenance of suspension-cultural cells that maintain embryogenic competence. Currently, two methods that have bsen disclosed relating to transformation of cotton somatic embryogenic materials via Agrobacierium-mediated T-DNA conjugation are the subject of U.S. Pat 5 No. 5,583,036 and U.S. Pat No. 6,483,013. U.S. Pat. No. 5,583,036 refers to methods for the transformation of suspension cultures by co-cultivating in liquid medium cotton embryogenic callus with Agrobacterium tumefaciens bearing a Ti-plasmid that contained a gene of interest. U.S. Pat. No. 6,483,013 refers to a method for transformation of cotton embryogenic calli that were initiated and propagated on solid high auxin media and wherein the co-cultivation with Agrobacterium tumefaciens was performed on solid media. Both methods employed somatic embryogensis to regenerate fertile cotton plants. Here, as indicated, the invention provides methods for transformation of suspension cell cultures and their regeneration into fertile plants which represent improvements over these methods. In particular, the use of a co-culture technique carried out on a porous solid support, such as a membrane or filter, greatly enhances transformation efficiency in plants. Other aspects of the present invention include the use of various media compositions. BRIEF DESCRIPTION OF THE FIGURES Figure 1 shows gene organization of PZP.11 l-35S:GFP. L and R represent the left and right borders, respectively. Plant selection maifaa: gene (NPTII) is under control of CaMV 35S promoter and 35S terminator and GFP is under control of 35S promoter and Nos terminator. Figure 2 shows the structure of pro-embryogenic calli (S4) propagated in suspension cultures. Figure 3 shows darkening of suspension cultures and solutions. (A) represents culture S16 cultured constantly in LM1; (B) shows culture S16 rotating in four different media (LM1, LM2, LM3,andLM4). Figure 4 shows the effects of cytokinins on somatic embryo yield. Approximately 0.1 mg calli mass was plated on either MS medium (basic), or MS supplemented with 0.01 mg/I NAA (NAA), I mg/1 6BA (BA), 1 mg/1 2IP or 1 mg/1 zeatin riboside (ZR). S5 and S16 are two suspension cultures. The number of somatic embryos were scored after one month. Results shown represent the average of three replica plate sets. Figure 5 depicts the effect of zeatin riboside on somatic embryo production with respect to S5 suspension cultures after two subcultures in Rl medium and one subculture in R2 medium. The panels are as follows: (A) No zeatin riboside in all subcultures; (B) 1 mg/1 zeatin riboside added during the first subculture (only 2 sectors shown); (C) 1 mg/1 zeatin riboside added during the first and second subcultures; (D) 1 mg/1 zeatin riboside added during three subcultures. 6 Figure 6 shows co-culture of T-DNA recipient cells and donor cells on a nylon membrane (Hybond-N). Figure 7 (A) shows selection on solid Rl medium in sectors; (B) selection on a culture raft in liquid medium; (C) depicts transformed, GFP+ cells 5 days after co-culture. Figure 8 depicts transformed GFP+ embryos (A) and embryonic tissues (B) one month after culture on selective medium Rl. Figure 9 shows germinated embryos (A) and embryo-like tissues (B) 4 months after co-culture. Figure 10 shows plantlets with multiple shoots derived from embryo-like tissue. Figure 11 shows potting ready plantlets derived from a germinated somatic embryo. Figure 12 shows healthy flowering plants 7-8 months after co-culture. Figure 13 shows GFP+ leaves from a transgenic adult leaf (left panel) and background fluorescence from a non-transformed adult plant. Figure 14 shows callus sectors cultured in selective Rl medium for one month. (A) shows results from co-culture method described in U.S. patent No. 5,583,036. (B) shows results obtained according to the present inventive method. Figure 15 shows: (A) fresh pollens taken from wildtype (Coker 312) plants; (B) fresh pollen from transgenic plants derived from S16 (C) an aborted boll (from the same plant) with some fertilized ovules containing elongating fibers; (D) an enlarging boll 10 days after pollinating the same plant with wildtype pollens. DETAILED DESCRIPTION OF THE INVENTION The present invention relates generally to methods for production of transgenic plants, preferably cotton, maize, soybean, wheat, rice, and barley, and most preferably cotton, that express at least one gene of interest through integration of a copy of the gene in the nuclear genome. In particular, the invention provides a method for producing a transgenic plant, the method comprising providing a proembryogenic plant cell, and culturing the cell in a liquid medium to produce a cell suspension culture. On a porous solid support, the cell suspension culture is co-cultured with a culture of Agrobacterium tumefaciens that harbors a vector comprising an exogenous gene and a selectable marker, the Agrobacterium being capable of effecting the stable transfer of the exogenous gene and selectable marker to the genome of the cell. The co-culturing thereby generates a 7 population of cells. A cell from the population that expresses the exogenous gene can be selected and regenerated into a transgenic plant In an embodiment, the proembryogenic cell is derived from, obtained from, or is part of a callus. The porous solid support is preferably a membrane or a filter, and preferably comprises at least one of nylon, nitrocellulose, cellulose, or glass fibers. In an embodiment, the solid support is soaked in a liquid medium. In an alternate embodiment, the solid support is situated on an appropriate solid medium. The vector may be a plasmid, such as a Ti or Ri plasmid. The methods of the present invention represent an improvement over known methods of Agrobacteriumwediated transformation. If desired, the resultant transgenic (transformed) plant, can be backcrossed with a germplasm of interest using methods well known in the art. The plant cell employed in the present methods can be from any plant, without limitation, but is preferably a cotton, maize, soybean, wheat, rice, or barley cell, and most preferably cotton. Preferred cotton species include Gossypium kirsutum and Gossypium barbadense. Other plants, including other dicotyledons are also suitable for transformation by the methods of the present invention. In the present methods, the liquid medium can be a low auxin content medium (in a range, for example, from about 0 to about 0.1 mg/l NAA). Unless otherwise indicated, media used in the culturing steps of the methods described herein can be any media suitable and appropriate for the culture. Many such media are known and available in the art. Selection of cells is by chemical or genetic means, and can include the use of a reporter construct as a selectable marker. Such methods of selection are known in the art. In a preferred embodiment, the reporter construct constitutively expresses green fluorescent protein. A particularly preferred reporter construct is pPZPlll-35S:GFP. In an embodiment, the proembryogenic cell is obtained by sterilizing a plant seed, germinating the seed to generate pliint tissue, obtaining an explant from the plant tissue, and inducing callus formation from the explant. The seed may be sterilized in a bleach solution, preferably a solution which comprises about 30% bleach. The seed can be germinated in MS medium, and such germination can take place over about 4-14 days. The explant is preferably a root or a shoot tip. Methods of the present invention can further comprise inducing callus formation and initiating somatic embryogenesis in a solid medium, which can take place over a period of about one to about three months. Moreover, the methods can further comprise inducing differentiation of the 8 callus to generate proembryogenic tissue., and such differentiation can preferably occur on a hormone-free, solid medium for a period of time sufficient to generate proembryogenic tissues, which are preferably suspended, maintained and propagated in a liquid medium or series of liquid media with low auxin content. The suspension-cultured materials as described above are preferably sub-cultured regularly in a series of fresh media with differences in auxin content and nitrogen sources, and preferably at an interval of about 3 to about 30 days. The liquid media used as above preferably contains MS salt and B5 vitamins supplemented with low concentrations of auxin, preferably about 0-0.1 mg/1 NAA and/or about 0-1 mg/1 picloram. The alternative nitrogen sources, if present, are preferably amino acids, such as glutamine and/or asparagine, and preferably occur at concentrations of about 0.1-5 g/L The solid or liquid media referred to above preferably has a pH value of about 5.8 to about 6.5, preferably about 6.0 to about 6.4. Suspension cultures can be maintained on a rotating platform with a temperature in the range of about 26° to about 32°C and about a 16 hour lighting cycle. The co-culturing described herein can further comprise growing the Agrobacterium strains of interest in a low phosphate liquid medium, preferably MinAB medium supplemented with an appropriate concentration of virulence inducing agents, to a preferred density of about 0.1-0.5 OD600 units, providing an Agrobacterium with a pre-induced virulence. The culture may be reconstituted in a liquid medium conducive to good growth of T-DNA recipient cells and enhanced expression of Agrobacterium virulence. Alternatively, Agrobacterium strains may be engineered to express constitutively active virA mutants by inserting the gene in either the Agrobacterium genome or Ti or Ri plasmid vectors within the Agrobacterium, The suspension-cultured materials can be reconstituted in a liquid medium that is optimal for expression of Agrobacterium vir genes and mixed with Agrobacterium culture prepared as described, on a porous solid support, such as a membrane or filter. This mixture can be incubated under constant lighting for about 1-5 days. In an embodiment, the ceils or calli are transferred to hormone-free medium supplemented with appropriate antibiotics to suppress growth of non-transformed plant cells and Agrobacterium cells. The porous solid support can be a membrane, or filter, as described, and can be laid upon a suitable solid medium or soaked in a suitable liquid medium, the media preferably containing either MS salt or MinAB salt supplemented with B5 vitamins and glucose and/or glycerol as a carbon source. These media preferably have a pH value 9 between about 5.7 and about 6.5, preferably between about 5.7 and about 5.9. The co-cultivation preferably takes place at about 18-26°G, and under constant or continuous lighting. The Agrobacterium culture can be a fresh preparation or one that is cryo-preserved, such as, for example, in the presence of about 0-20% DMSO; about 0-90% glycerol or about 0-5 M sorbitol or any combination thereof. In an aspect, the invention also provides methods for regeneration of complete plants from pro-embryogenic suspension-cultured materials. Such methods include inducing re-entry into embryogenic development and embryo proliferation by placing suspension-cultured materials, with or without prior co-culture with Agrobacterium, in a hormone-free MS-based medium with reinforced KNO3, and subculturing regularly, such as for example, about every 3-4 weeks, in a medium with the same composition for a period sufficient to produce pre-globular to globular embryos. Further regular subculturing can be undertaken, again, for example, about every 3-4 weeks, in a solid, preferably MS-based medium supplemented with amino acids, preferably glutamine and asparagine at a concentration of about 0.1-5 gA, and reinforced KNO3 for about 4-12 weeks. Root and true leaf formation then can be induced in suitable media and resulting plantlets transferred into soil pots to produce flowering plants. The media included herein may be supplemented with appropriate antibiotics to inhibit growth of non-transformed cells and Agrobacterium cells when co-culture is employed. The subculturing can be performed in liquid medium, membrane-supported liquid medium, solid medium or other appropriate medium. These media preferably have a pH value of about 5.7 to about 6.5, more preferably about 6.0 to about 6.4. The cotton or other plant cells, somatic embryos and plantlets as referred to herein preferably are cultured at a temperature of about 25°-32 °C with about 16 hour lighting cycles, Co-cultured materials can be selected without prior washing. The invention also provides a method; as an extension and complementation to the methods already described herein, for rescue of infertile plants and accelerated production of commercial varieties comprising manual pollination of the plants, including male sterile plants, with pollens derived from zygotic seeds of either the same variety or a specific germplasm of interest Continued backcrossing in the following generations can be performed as needed or desired. In preferred methods, the Agrobacterium comprises a virA gene mutant. The virA gene mutant can be incorporated into the genome of the Agrobacterium or incorporated into the vector. 10 In the described methods, the regeneration of cells into plants can be enhanced by addition of a cytokinin. For cotton, in particular, the cytokinin is preferably a zeatin or derivative thereof. Moreover, in an embodiment, the proembryogenic plant cell is initiated on a solid medium comprising a low concentration of 2,4-D and cytokinin. The proembryogenic cell may also be propagated in a hormone free liquid medium and/or a low auxin liquid medium. Techniques for introducing exogenous genes into Agrobacterium such that they will be transferred stably to a plant or plant tissue exposed to the Agrobacterium are well-known in the art. It is advantageous to use a so-called "disarmed" strain of Agrobacterium or Ti plasmid, that is, a strain or plasmid wherein the genes responsible for the formation of the tumor characteristic of the crown gall disease caused by wild-type Agrobacterium are removed or deactivated. Numerous examples of disarmed Agrobacterium strain;; are found in the literature (e.g., pAL4404, pEHAlOl and pEH 105 (Walkerpeach & Velten, 1994)). It is further advantageous to use a so-called binary vector system, such as that described in Scliilperoort et al., 1990, 1995. A binary vector system allows for manipulation in £". coli of the plasmid carrying the exogenous gene to be introduced into the plant, making the process of vector construction much easier to cany out Similarly, vector construction, including the construction of chimeric genes comprising the exogenous gene that one desires to introduce into the plant, can be carried out using techniques well-known in the art Chimeric genes should comprise promoters that have activity in the host in which expression is desired. For example; it may be advantageous to have a series of selectable markers for selection of transformed cells at various stages in the transformation process. A selectable marker (for example a gene conferring resistance to an antibiotic such as kanamycin, cefotaxime or streptomycin) linked to a promoter active in bacteria would permit selection of bacteria containing the marker (i.e., transformants). Another selectable marker linked to a plant-active promoter, such as the CaMV 35S promoter or a T-DNA promoter such as the NPTIINOS promoter, would allow selection of transformed plant cells. The exogenous gene that is desired to be introduced into the plant cell should comprise a plant-active promoter in functional relation to the coding sequence, so that the promoter drives expression of the gene in the transformed plant. Again, plant-active promoters, such as the CaMV 35S, the NPT' II NOS promoter or any of a number of tissue-specific promoters, are well-known in the art and selection of an appropriate promoter is well within the ordinary skill in the art 11 live present method can be used to produce transgenic plants expressing any number of exogenous genes, and is not limited by the choice of such a gene. The selection of the desired exogenous gene depends on the goal of the researcher, and numerous examples of desirable genes that could be used with the present invention are known in the art (e.g., the family of Bacillus thuringiensis toxin genes, herbicide resistance genes such as shikimate synthase genes that confer glyphosate resistance, U.S. Patent No. 5,188,642, or a 2,4-D monooxygenase gene that confers resistance to 2,4-dichlorophenoxyacetic acid (2,4-D) (Bayley et al., 1992), male sterility genes such as the antisense genes of U.S. Patent No. 5,741,684 (Fabijanski, et al.), or even the elaborate crop protection systems described in U.S. Patent No. 5,723,765 (Oliver et al.)). As evidenced herein, this invention provides, inter alia, methods utilizing different suspension initiation and maintenance procedures. As a non-limiting example, cotton root and shoot tips from mature seed were used as explants for callus induction in the presence of both cytokinin and a low concentration of 2,4-D. A somatic embryogenesis developmental pathway can be switched on upon transferring to hormone-free, high KNO3-content solid medium. Suspension culture of selected callus can be initiated in a liquid medium with a similar composition supplemented with low concentration of auxin (0.01 mg/1 NAA). Such cultures can be maintained at various stages of early embryogenic development depending on the time the callus was transferred to liquid medium. The cell cultures produced may undergo darkening with extended culture if the same medium was constantly used- However, an effective solution for this problem includes rotating the cultures in four variants of media. This allows the cultures to undergo a brief cell differentiation-proliferation cycle thanks to the embryo development-enhancing property of reduced nitrogen sources (Davidonis and Hamilton, 1983). The suspension cultures thus prepared have good synchrony in development and have a uniformly yellowish color. The embryogenic competence varies among different cell lines. Further provided is a media composition for accelerated regeneration of somatic embryos from cell cultures via treatment with cytokinins that significantly improve early embryogenic development Cytokinins have been found to play an important role in somatic embryogensis (Xing et al., 1999; Sagare et al., 2000; Tokuji and Kuriyama, 2003). Their use in cotton regeneration, however, has never been reported- It was discovered that cytokinins, particularly zeatin riboside, significantly improved somatic embryo formation when used at the early stages of plant regeneration. Proper use of the hormone leads to shorter duration to reproduce complete plantlets 12 due to increased conversion rate to globular stage embryos and accelerated development of leaves. Previously, regeneration of suspension cells was achieved by either culturing the cells in liquid medium or plating them out uniformly on solid media (Finer, 1988; European Pat. 0317512B1, US Pat. 5,583,036). Both methods differ widely from the natural developing environment of zygotic embryos. Furthermore, as the materials need repeated sub-culturing, the plated calli are tedious to work with and slower growing transformants may be selected out during regeneration. This invention thus simplifies the handling process of suspension-cultured cells/calli by partially embedding in solid medium in sectors, which are easier for material transfer between subcultures and the cell clustering in such manner may prevent dehydration during culture in solid media. Virulence of Agrobactefium is known to be influenced by environmental pH and temperature. Optimal virulence occurs at around pH5.7 below 25°C (Rogowsky, et al., 1987; Fullner and Nester, 1996). These factors have been taken into account to develop medium different from that which has been used for high efficiency transformation of filamentous fungi (Bundock et al., 1995; de Groot et al., 1998), to accommodate healthy growth of plant cells, particularly cotton. Co-culture is performed at around 24°C with pre-induced cultures. Alternatively, Agrobacterium strains maybe engineered to express virA mutants (McLean et al., 1994). In light of the preceding description, one of ordinary skill in the art can practice the invention to its fullest extent. The following examples, therefore, are merely illustrative and should not be construed to limit in any way the invention as set forth in the claims which follow. A reporter construct, pPZPl 11-35S:GFP (Xu et al., unpublished data) that constitutively expresses the Green Fluorescent Protein (GFP) (Fig. 1) was used to illustrate the technical processes and monitor the effectiveness of the procedures. As indicated, other suitable markers may also be used. EXAMPLE 1 Generation of Cotton Suspension Cell Cultures from Explants Cotton seeds are sterilized by soaking in 30% bleach solution for 45-90 minutes. After thorough rinsing in water, seeds are incubated in water at 28° C tor 1 day and further incubated on SGM medium at 28° C with 16 hours lighting for 4-14 days. Roots are cut into short (3-5 mm) segments and allowed to develop calli on SMI medium for approximately one month. Alternatively, embryogenic shoot tips may be dissected out irom the seeds and used for callus induction. The calli 13 are separated from the explants and further incubated on SMI medium for approximately one month. To induce somatic embryogenisis, the calli are transferred to SM2 medium, subcultured every 3-4 weeks on fresh medium until loosely structured yellowish or reddish calli are obtained. Up to 200 mg of the isolated callus are placed in 50 ml LM1 medium in a suitable container, for example, a 250 ml conical flask or cylinder tissue culture container, and incubated at 28°C on a shaking platform (120 RPM) with 16 hours lighting cycles. The cells/callus tissues are subcultured, typically every 7-14 days by transferring 15 ml of the culture (approximately 2 ml cell mass in a stabilized culture) to 35 ml fresh medium in a new container. Four variants of liquid media (LM1, LM2, LM3 and LM4) are used cyclically. EXAMPLE 2 Introduction of a Gene of Interest into Cotton Cells A gene of interest is delivered into cotton cells via Agrobacterium-mediaXed T-DNA conjugation by co-cultivation of freshly subcultured cotton suspension culture with a culture of Agrobacterium that harbors the gene of interest and a dominant selection marker in an appropriate Ti or Ri plasmid vector. The mixtures are co-spotted on a sheet of porous membrane or filter paper laid atop a SIM1 or SIM2 plate for a time sufficient to produce a desired number of transformed cotton cells. Alternatively, 3-4 sheets of filter paper that have been soaked with a liquid medium may be used in place of the solid medium. For best results, pre-induced Agrobacterium culture prepared as described for transformation of filamentous fungi are used although common bacterium cultures may be used (de Groot et aL, 1998). EXAMPLE 3 Regeneration into Transgenic Cotton Plants from Transformed Cells After co-cultivation, the cells are transferred to Rl medium supplemented with appropriate antibiotics for suppression of non-transformed cotton cells and the Agrobacterium cells that remain attached. Selection of transformed plant cell[s may also be achieved by visual markers. The co-cultured cotton cells need no wash and can be transferred to selective solid medium as callus Asectors® (normally 100-150 per co-culture). Alternatively, each co-culture may be transferred as a whole onto a culture ran in the same medium lacking phytagel (Fig. 7). Culture in liquid medium is normally limited to the initial 3-4 weeks. After that, it preferably is transferred to solid Rl 14 medium. A further 3-4 weeks in medium Rl is normally required so that multiple embryos can be obtained. Further culture in Rl medium is possible if the undifferentiated embryos were not seen. Subsequently, the antibiotic resistant globular or later stage embryos are cultured on R2 medium for 3-4 weeks and this is repeated one more time. Antibiotics may be omitted from the 2nd culture on R2 medium. Fully developed embryos (no root, with cotyledons) or green embryo-like tissues with no obvious cotyledons are transferred to R3 medium and full plantlets are transferred to R4 medium. In about 3-4 weeks, plantlets are planted in soil pots. EXAMPLE 4 Preparation of Suspension Cell Cultures Cotton seeds (Coker 312) were sterilized by soaking in 30% bleach (Clorox) solution for 45 minutes and, after two washes in water, incubated in water at 28E C for one day. The seeds were further incubated on SGM medium at 28E C with 16 hours lighting cycles for 4 days. White-colored roots were cut into short (3-5 mm) segments and allowed to develop calli on SMI medium for approximately one month. The calli were separated from the explants and incubated on the same medium for approximately one more montlL Hie calli were transferred to SM2 medium, subcul cured approximately every 3-4 weeks on fresh medium until loosely structured calli were obtained. Approximately 200 mg of the isolated callus were placed in 50 ml LM1 medium in a 250 ml conical flask and incubated at 28° C on a shaking platform (120 RPM) with 16 hour lighting cycles. The suspension cultures were subcultured every 7-14 days by transferring a 15 ml of aliquot (approximately 2 ml cell/calli mass in a stabilized culture) to 35 ml fresh medium in a new container. Among 5 calli selected, three staibilized as vigorous growing yellowish cultures consisting of calli of various sizes when the subculture was performed cyclically in four different media (LMl, LM2, LM3, and LM4). The calli showed no or limited embryogenic structure when examined under a scanning electron microscope (Fig. 2). Severe browning or darkening could occur if a single medium was constantly used (Fig. 3). Cultures S4 and S5 bom successfully developed into somatic embryos when they were transferred to solid medium Rl. 15 EXAMPLE5 Preparation of Cell Suspension Cultures Cotton seeds were sterilized by soaking in 30% bleach (Clorox) solution for 45 minutes and, after two washes in water, incubated in water at 28E C for 24 hours. The seeds were further incubated on SGM medium at 28E C with 16 hour lighting cycles for 4 days. White-colored roots were cut into short (3-5 mm) segments and allowed to develop calli on SMI medium for one month. The calli were separated from the explants aind cultured on the same medium for approximately one more month. The calli were transferred to SM2 medium and subcultured every 3-4 weeks on fresh medium until loosely structured calli were obtained. Up to 200 mg of the isolated callus were placed in 50 ml LM1 medium in a 250 ml conical flask and incubated at 28° C on a shaking platform (120 RPM) with 16 hour lighting cycles. The suspension cultures were every 7 days by transferring a 15 ml aliquot (approximately 2ml cell/calli mass when the cultures were stabilized) to 35 ml fresh medium in a new container. Among 3 calli selected, two stabilized as vigorous growing yellowish calli when subculture was performed cyclically in four different media (LM1, LM2, LM3, and LM4). Cultures S15 and S16 both successfully developed into somatic embryos when they were transferred to solid medium Rl. EXAMPLE 6 Preparation of Cell Suspension Cultures Cotton seeds were sterilized by soaking in 30% bleach (Clorox) solution for 45 minutes and incubated in water at 28E C for 24 hours after rinsing twice with water. The seeds were further incubated on SGM medium at 28E C with 16 hours lighting cycles for 4 days. White-colored roots were cut into short (3-5 mm) segments and allowed to develop calli on SMI medium for approximately one month. In addition, embiryogenic shoot tips were dissected from the sterilized seeds and used for callus induction as with the root explants. A month later, yellowish calli at the tips of both of kinds of explants were dissected out and incubated in the same medium for one more month. The calli were transferred to SM2 medium, subcultured every 3-4 weeks on fresh medium until loosely structured calli were obtained. Approximately 200 mg of the isolated callus were placed in 50 ml LM1 medium in a 250ml conical flask and incubated at 28° C on a shaking platform (120 RPM) with 16 hours lighting cycles. The suspension cultures were subcultured every 7 days by transferring a 15 ml aliquot (approximately 2 ml cell/calli mass when cultures were stabilized) 16 to 35 ml fresh medium in a new container. All 7 selected calli stabilized as vigorously growing yellowish calli. EXAMPLE 7 Effects of Cytokinins on Early Embryogenic Development Approximately 0.1 g of the suspension-cultured calli mass was plated out in medium Rl supplemented with 0.01 mg/1 NAA supplemented either 1 mg/16BA, 2IP or zeatin fiboside. The number of globular or later stage embryos was scored after 5 weeks incubation. In both cultures tested (S5 and SI 6), zeatin riboside treatment led to significant increases in the yield of embryos (Fig. 4). EXAMPLE 8 Effects of Cytokmins on Early Embryogenic Development Pro-embryogenic calli were placed in Rl medium with or without 1 mg/1 zeatin riboside. The calli were cultured on the zeatin riboside-containing Rl medium for 1-3 months. A significant increase in the number and sizes of embryos was observed in plates treated with zeatin riboside and the effect became more dramatic with continued exposure to zeatin riboside (Fig. 5 ). EXAMPLE 9 Transformation of Supension Culture with Induced Agrobacterium Culture Binary T-DNA vector, pPZPl 11-35S:GFP, was introduced into Agrobacterium tumefaciens strain AGL1 by electroporation. A saturated culture of the strain was diluted 5-fold with IM medium and further incubated at 28° C for 6 hours until it reached approximately 0.3 OD600 unit. Approximately 0.5 ml of suspension cultures S5, and S5 that were cultured either in LMl, LM2, LM3 and LM4 was mixed with 0.2 ml Agrobacterium culture and co-spotted on a Hybbond N membrane (Amersham Pharmacia) that was laid atop Rl medium supplemented with 100 pM acetosyringon. After 3 days of co-culture at 24° C with constant lighting, the calli on nylon membranes were nnsed with a suspension medium (e.g., LMl supplemented with 100 mg/I kanamycin and 450 mg/1 Cefotaxim). The whole membrane was transferred to Rl or R2 medium supplemented with 100 mg/I kanamycin and 300 mg/1 Cefotaxime and cultured at 28° C with 16 hour lighting cycles. GFP positive calli were seen after one month. The remaining Agrobacterium 17 culture was dispensed into 0.5 ml aliquots and equal volume of 14% DMSO was added. The bacterium stock was stored frozen at B80° C until use. EXAMPLE 10 Transformation of Suspension Cultures Just before use, a tube of the frozen AGL1 culture was thawed and the bacterial cells were collected by centrifugation. The pellets were resuspended in 0.5 ml Cl medium (pH 5.7) mixed with 0.5 ml (approximately 0.2 g cell mass) and co-spotted on a Hybond-N membrane (Amersham Pharmacia) or Whatman 4 filter paper atop CP1 medium (pH5.7). Multiple independent co-cultures (3-4) could be performed on a single membrane (Fig. 6). After co-culture, the cells/calli were transferred (without washing) to medium Rl supplemented with 100 mg/1 kanamycin and 200 mg/1 Cefotaxime and culured at 28°C with 16 hours lighting cycles. Each co-culture was divided into up to 160 sectors, each representing a single large calli or a small clump of micro-calli (Fig. 7A). Alternatively, the whole co-culture was transferred to a culture raft on LM1 supplemented with 100 mg/l kanamycin and 200 mg/1 Cefotaxime (Fig. 7B). Distinct foci of green fluorescence were visible from the 5* day on selective medium (Fig. 7C). After 4 weeks in Rl medium, the kanamycin resistant sectors were transferred individually to solid Rl medium supplemented with the same antibiotics, hi the meantime, the liquid-cultured calli were transferred to solid selective medium Rl. Each sector was examined under fluorescent microscope for green fluorescence at various time points after co-culture. GFP positive somatic embryos started to appear in about one month (Fig. 8). By 3 months after co-culture, up to 38 sectors were found to contain embryos positive for green fluorescence in a single co-culture. Sectors positive for GFP but not yet producing somatic embryos are several folds higher. Both types of co-culture support gave satisfactory results, which are summarized in Table 1. 1. Effects of different Supports and Regeneration Media Support type 1st medium Total Sector GFP+ GFP+ GFP+ embryos+ GFP+ embryo+ Date 28/5/03 28/5/03 24/6/03 30/7/03 30/7/03 30/8/03 30/8/03 S4G020503-11 HybondN Rl-plate1 120 2 8 14 0 11 1 S4G020503-12 HybondN Rl -plate 160 32 69 61 6 52 20 S4G020503-13 Whatman 4 Rl-plate 180 23 63 72 13 69 38 S4G020503-14 Whatman 4 Rl-plate 100 7 19 28 4" 18 10 S4G020503-1 HybondN Rl-raft2 100 6 39 41 7 36 11 S4G020503-2 HybondN Rl-raft 140 21 114 118 14 94 31 S4G020503-3 Whatman 4 Rl-raft 140 9 39 40 7 33 14 S4G020503-4 Whatman 4 Rl-raft 135 5 8 7 0 8 1 S5G020503-11 HybondN Rl-plate 100 16 72 76 23 61 26 S5G020503-12 HybonRIN Rl-plate 180 31 152 143 29 115 37 S5GO2O5O3-13 Whatman Rl-plate 155 27 108 105 12 88 27 S5G020503.14 Whatman 4 Rl-plate 160 47 135 108 16 97 34 S5G020503-4 Whatman 4 Rl-raft 160 60 135 102 21 90 15 Note: 1. Solid medium Rl with 100 mg/1 kanamycin, 20.0 mg/1 Cefotaxime. 2. Liquid medium Rl with 100 mg/1 kanamycin, 200 mg/1 Cefotaxime. Cultured in Gibco BRL liquid culture system. 19 EXAMPLE 11 Transformation of Suspension Cultures with a pPZPl 11-35S:GFP Construct. A tube of the frozen AGL culture harboring pPZPll l-35S:GFP was thawed and the bacterial cells were collected by centrifugation. The bacterial pellets were resuspended in Cl (pH5.7). Suspension cultures (S4, S5 and S16) were washed in the Cl medium. Approximately 0.5 ml cultures were mixed with 0.4ml Agrobacterium suspension and co-cultured on nylon membranes atop CP1 medium (pH5.7). After co-culture, the calli were transferred (without washing) to medium Rl supplemented with 100mg/l kanamycin and 200 mg/1 Cefotaxime and incubated at 28° C with 16 hour lighting cycles. Each co-culture was divided into up to 160 sectors, each representing a single large calli or a small clump of micro-calli. Alternatively, the whole co-culture was transferred to a culture raft on LM1 supplemented with 100 rag/1 kanamycin and 200 mg/1 cefotaxime. After two months in selective Rl medium, the kanamycin resistant sectors were transferred to fresh Rl plates supplemented with lmg/1 zeatin riboside with the same antibiotics and continued culturing for 4.5 weeks. Kanamycin resistant calli were transferred to R2 medium supplemented with 50 mg/l kanamycin and 200 mg/1 cefotaxime. This is repeated two more times in antibiotics-free R2 medium and large, vigorously growing embryos or green calli, which may appear in the first R2 culture, were selected and transferred to R3 medium. Embryos may germinate and develop roots and true leaves (Fig. 9A). Interestingly, the zeatin treatment allowed many cotyledon-less abnormal embryo and even green tissues, such as those shown in Fig. 9B, to develop into shoots. Often, multiple shoots were developed (Fig, 10). Plantlets that had developed true leaves were plentiful in 3-4 weeks and were cultured in R4 medium for further leaf and root development (Fig. 11). Plantlets with 6-8 leaves were potted in soil and by about 7-8 months after co-culture, the plants started to flower (Fig. 12). Approximately 77% of the adult plants were positive for GFP fluorescence (Fig. 13). Up to 26 healthy plants could be produced from a single co-culture. Of the 18 putative transformants analyzed by Southern blotting analysis, 17 were positive for the GFP transgene (95%) and 7 contained a single transgene (39%). The detailed results of the transformation were shown in Table 2. table 2. Summary of Transformation Done on 23/5/03. Date 26/5/03 21/6/03 24/7/03 27/8/03 Sectors Sectors KanRNo. GFP+ KanRNo. GFP+ lstPlantlet Healthy Family First Flower GFP+% plants Medium R1-K100C R1-K100C R1-ZK50C R1-K50C R4 Soil S4G230503-2 120 120 41 12 11 7 S4G230503-3 120 120 16 7 6 3 S5G230503-2 120 120 94 23 60 43 13/10/03 S5G230503-3 120 120 68 27 66 44 15/9/03 S16G230503-2 120 120 88 59 72 62 22/9/03 19 26/12/03 89% S16G230503-3 160 160 138 87 113 97 22/9/03 26 26/12/03 69% S16G230503-4 160 160 132 89 117 105 22/9/03 26 02/01/04 72% Note: All the figures represent sector numbers. Healthy family indicates sectors that have developed at least one plant with normal flower plant. R1-K100C: Rl medium with 100 mg/1 kanamycin, 200 mg/1 cefotaxirne R1-K50C: Rl medium with 50 mg/1 kanamycin, 200 mg/1 cefotaxime R1-ZK50C: R1-K50C medium with 1 mg/ml zeatin riboside 21 EXAMPLE 12 Effects of pH in Co-culture Media Frozen Agrobacterium stocks prepared previously were collected by centrifugation and suspended in Cl with pH adjusted to 5.2,5.7, 5.9 and 6.2. Approximately 0.2 mg suspension cell mass was mixed with 0.4 ml Agrobacterium suspension and co-cultured on nylon membranes atop the corresponding solid medium (CP1, pH 5.2-6.2). Three sets of co-cultures were performed under each condition. The number of sectors showing GFP fluorescence was scored after 2 months culture on selective Rl medium. Significantly better results were obtained with medium pH higher than 5.2. On average, 71%, 81% and 83% of callus sectors were positive for GFP fluorescence in Cl-pH5.2, Cl-pH 5.7 and Cl-pH6.2, respectively. EXAMPLE 13 Comparison of Co-culture Methods To determine factors that contributed to the high transformation efficiency obtained with the present methods, we performed transformation of our suspension cell cultures using the method essentially as disclosed previously (U.S. Pat No. 5,583,036). The T-DNA donor preparation, AGL1 strain harboring pPZPl 11-35S:GFP, was made in LB medium. The bacterium cells were collected by centrifugation and resuspended in MS medium supplemented with lmg/1 NAA to 0.5 OD600 unit. Approximately 0.2 g suspension cultures (S5 and SI6) was mixed with 2 ml fresh Agrobacterium culture in a conical flask which was left at 28°C for two hours for the Agrobacterium cells to attach to the suspension cells. After removing the liquid medium, 10 ml MS medium supplemented with 1 mg/1 NAA was added to the flask. The cells were cultured on a shaking platform (100 rpm) for 18 hours. The suspension cells were then washed (twice) with MS medium and placed on selective Rl medium in sectors. In a parallel experiment, the same Agrobacterium strain was prepared freshly with no freezing as described in Example 9. Cultures S5 and S16 were co-cultured as described in Example 10. After 30 days of culture on selective Rl medium, the number of somatic embryos was scored. While about 64% (S5) and 83% (S16) of the calli sector were positive for GFP fluorescence when oo-culture was performed using our method, the rates dropped to only 1% (S5) and 13% (S16) respectively when co-culture was performed in liquid medium in an agitating conical flask (Fig. 14). It is also clear that the kanamycin resistant sector had grown to significantly larger sizes with more embryos developed using a co-culture procedure according to the present invention. 22 EXAMPLE 14 Restoration of Fertility of Transgenic Plants Self-fertile transgenic plants were obtained with the methods disclosed herein, although some defects in pollen development were seen (Fig. 15). Consequently, manual pollination may be preferred to produce seeds. The majority of plants from S16 were fertile when pollinated by pollens of plants derived from seed (Fig. 15). This can be an advantage, as backcrossing is often required to produce a commercial variety. Abbreviations and terms used herein: MS salt (Murashige and Skoog, 1962): 332.02 mg/1 CaCl2 170mg/lKH2PO4 1900mg/lKNO3 180.54 mg/1 MgSO4 128.4 mg/lNaH2PO4 1650mg/lNH4NO3 0.025 mg/I CoCl2.6H20 0.025mg/ICuSO4.5H2O 36.7mg/lFeNaEDTA 6.20 mg/1 H3BO4 0.83 mg/1 KI 16.9mg/IMnSO4.H2O 0.25 mg/I Na2MoO4.2H2O 8.60 mg/1 ZnSO4.7H2O B5 vitamins 100 mg/l myo-inositol 1 mg/1 nicotinic acid 1 mg/I pyridoxine HCI, lOmg/lthiamineHCl SGM: Half-strength MS salt and half strength B5 Vitamins, 0.02 mg/1 NAA, 0.1 mg/I MET {multi-effect trizazole), 5 g/I glucose, 2 g/1 phytogel, pH 6,0 SMI: MS salt, B5 vitamins, 0.1 -mgfl Kinetin, 0.05 mg/1 2,4-D, 30 g/1 glucose, 2 g/1 phytogel, pH 6.2 SM2: MS salt, B5 Vitamins, 1.9 g/I KNQ3, 30 g/1 glucose; 2.5 g/I phytogel, pH 6.4 23 LM1: MS salt, B5 Vitamins, 1.9 g/1 KNO3) 0.01 mg/l NAA, 30 g/1 glucose, pH 6.4 LM2: MS salt with no NH4NO3, B5 Vitamins, 1.9 g/1 KNO3, 0.01 mg/1 NAA, 30 g/1 glucose, 1 g/1 glutamine, 0.5 g/1 asparagine, pH 6.4 LM3: MS salt, B5 Vitamins, 0.05 mg/1 NAA, 30 g/I glucose, pH 6.4 LM4: MS salt, B5 Vitamins, 0.01 mg/1 NAA, 0.5 mg/1 picloram, 30 g/1 glucose, pH 6.4 Cl 2.05 g/1 K2HPO4 1.45 g/1 KH2PO4 0.6g/lMgSO4-7H2O 0.5g/l(NH4)2SO4 0.5g^NH4NO3 0.01 g/1 CaCl2 2 g/1 glucose) 0.5 mg/1 ZnSO4-7H2O 0.5 mg/1 CuSO4-5H2O 0.5 mg/1 H3BO3 0.5 mg/1 MnSO4-H2O 0.5mg/lNaMbO4-2H2O lmg/lFeSO4 B5 Vitamins 0.01 mg/1 NAA 0.5 mg/1 picloram 40mMMES 6.5% glycerol 0-100 /iM acetosyringone pH 5.7-6.0 CT1: Cl,plus4g/lphytogel. Ri: MS salt,B5 Vitamins, 1.9 g/1 KNO3,30 g/Lglucose, pH6.4,2.8 g/I phytogel. R2: MS salt with no NH4NO3, B5 Vitamins, 1.9 g/I KNO3,30 g/1, glucose, 1 g/1 glutamine, 0.5 g/1 asparagine, pH 6.4, 2.8 g/1 phytogel H3: MS, B5 vitamins, 30 g/1 glucose, 0.01 mg/1 NAA, 3 g/1 phytogel, pH 6.4 R4: Half-strength MS, B5 vitamins 24 MinAB 2.05 g/l K2HPO4 1.45g/lKH2PO4 0.6g/lMgSO4-7H2O 0.3g/lNaCl 0.5 gftXNH^SC^ O.5g/1NH4N03 0.01 g/l CaCl2 2 g/l glucose 0.5 mg/1 ZnSO4-7H2O 0.5 mg/i CuSO4-5H2O 0.5 mg/1 H3BO3 0.5 rag/1 MnSO4-H2O 0.5 mg/1 MbO4-2H2O, lmg/lFeSO4 pH7.0 IM 2.05 g/l K2HPO4 1.45 g/l KH2PO4 0.6g/lMgSO4-7H2O O.3g/lNaCl 0.5g/1(NH4)2SO4 0.5 g/l NH4NO3 0.01 g/l CaCl2, 0.5 mg/1 ZnSO4-7H2O 0.5 mg/1 CuSO4-5H2O 0.5 mg/1 H3BO3 0.5 mg/1 MnSO4-H2O 0.5 mg/1 NaMbO4-2H2O, lmg/lFeSO4 0.5% glycerol 2 g/l glucose 100-200 fiM acetosjringone: 40mMMES pH5.7 BIBLIOGRAPHY Ashbyetal.(l988). J.fiacteriol. 170:4181-4187. Bayley et al. (1992). Theoretical and Applied Genetics 83: 645-649. Bolten et al. (1986). Science 232: 983-985. 25 Bundock et al. (1995). EMBOJ. 1995,14:3206-14. Chair, H. et al. (1997). KasetsartJ.. vol. 33, pp. 149-156. Chen and Winans (1991). J.Bacteriol. 173: 1139-1144). Cousins, Y.L. et al. (1991). Aust. J. Plant Physiol. 18: 481-494. Davidonis, G. H. and Hamilton, R. H. (1983). Plant Sci. Lett. 32: 89-93. de Groot et al. (1998). Nat. BiotechoL. 16:839-42. Finer, J. (1988). Plant Cell Rep., 7: 399-402. Finer and McMulIen (1990). Plant Cell Reports, i:586-589. Firoozabadyetal.(1987). Plant Molecular BioL 10:105-116. Fullner and Nester (1996): J. Bacteriol. 178:1498-504. Hansenetal.(1994). Proc. Nat'l Acad. Sci. 91:7603-7607. Hoshino et al. (1988). Plant Biotech.. 15(1)- 29-33. Levee etal. (1999). Molecular Breeding, 5:429-440. McCabe and Martinell (1993). Bio/Technology 11:596-598. McLean (1994). J. Biol. Chem. 269:2645-2651. Murashige and Skoog (1962). Physiol. Pliant, 15:473. Murray etal. (1993). Transgenic Plants, vol. 2, pp. 153-168. Otani et al (1998). Plant Biotech, vol. 15, pp. 11-16. Owens et al. (1988). Plant Phvsiol.. vol. 88, pp. 570-573. Piers etal. (1996). PNAS, 93:1613-1618. Rogowsky etal. (1987). J Bacteriol. 169:51011-12. Sagare etal. (2000). Plant Sci. 160:139 147. Scheeren-Groot et al. (1994). J. Bacteriol. 176: 6418-6246. Sheikholeslam and Weeks (1987). Plant Mol. BioL. vol. 8, pp. 291-298. Sehilperoort, RA. et al. (1990). Process for the incorporation of foreign DNA into the genome of dicotyledonous plants. U.S. Patent No. 4,940,838. Schilperoort, RA. et al. (1995). Process for the incorporation of foreign DNA into the genome of dicotyledonous plants. U.S. Patent No. 5,464,763. Stachel et al. (1985). Nature. 318: 624-629. Still et al. (1976). J. Amer. Soc. Hort. Sci., vol. 101, pp. 34-37. Tokuji and Kuriyama (2003). J. Plant Phvsiol. 160:133-41. Trolinder, N. L. and Goodin, J. E. (1987). Plant Cell Reports 6:231-4. 26 Umbeck etal. (1987). Bio/Technology 5:263-266. Veluthambi et al. (1989). J. Bacteriol. 171:3696-3703. Vemade et al (1988). J. Bacteriol 170: 5822-5829. Walkerpeach, C.R. and Velten, J. (1994). Plant Mol. Bioi. Manual Bl: 1-19. Xing,D.etal (1999). Chin. J. Biotechnol. 15:59-64. WE CLAIM: 1. A method- for producing a transgenic cotton plant, said method comprising: (a) providing a proembryogenic cotton cell; (b) culturing the proembryogenic .cell in a liquid medium to produce a cell suspension culture; (c) providing a culture of preinduced Agrobacterium tumefaciens that harbors a vector comprising an exogenous gene and a selectable marker, the Agrobacterium being capable of effecting the stable transfer of the exogenous gene and selectable marker to the genome of a plant cell, wherein the preinduced Agrobacterium tumefaciens is preinduced for virulence; (d) mixing a portion of the cell suspension culture and a portion of t. e Agrobacterium culture; (e) co-culturing the mixture of the cell suspension culture and t.lJe Agrobacterium culture on a porous solid support in contact with a co-culture medium for 1-5 days under continuous light to produce a population of cells some of which have been transformed with the exogenous gene and the selectable marker> (f) selecting cells that express the exogenous gene from the population of cells; and (g) regenerating the selectecells into a transgenic cotton plant by somatic embryogenesis. 2. The method as claimed in claim 1, wherein the proembryogenic cell is derived from callus. 3. The method as claimed in claim 1, wherein said solid support is selected from the group consisting of a membrane and a filter. 4. The method as claimed in claim 1, wherein the porous solid support comprises at least one of nylon, nitrocellulose, cellulose, and glass fibers. 5. The method as claimed in claim 1, wherein the cotton is a member selected from the group consisting of Gossypium hirsutum and Gossypium barbadense. 6. The method as claimed in claim 1, wherein the Agrobacterium is preinduced by culturing the Agrobacterium in the presence of a virulence inducing agent. 7. The method as claimed in claim 1, wherein the Agrobacterium is preinduced by culturing Agrobacterium that constitutively expresses an active virA mutant. 8. The method as claimed in claim 1, wherein the proembryogenic cotton cell is obtained by: obtaining an explant from a cotton plant; inducing callus formation from the explant; and generating proembryogenic tissue from the callus. 9. The method as claimed in claim 8, wherein the proembryogenic tissue is generated from the callus by initiating somatic embryogenesis of the callus. 10. The method as claimed in claim 8, wherein the proembryogenic tissue is generated from the callus by inducing differentiation of the callus. 11. The method as claimed in claim 8, wherein the explant is obtained by: sterilizing a cotton seed; and germinating the cotton seed to generate plant tissue for use as an explant. 12. The method as claimed in claim 11, wherein the plant tissue is a root or a shoot tip. 13. The method as claimed in claim 1, wherein the solid support is in contact with the co-culture medium by soaking the solid support in a liquid co-culture medium. 14. The method as claimed in claim I, wherein the solid support is in contact vvith the co-culture medium by being laid on top of a solid co-culture medium. 15. The method as ctaimed in claim 1, wherein the co-culture medium in step (e) comprises MinAB salts, B5 vitamins, acetos)Tingone, glucos•e and glycerol. 16. The method as claimed in claim 1, wherein the co-culture medium in step (e) comprises MS salts, B5 vitamins, acetOS)Tingone, glucose and glycerol.

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METHODS FOR HIGH EFFICIENCY TRANSFORMATION AND REGENERATION OF PLANT SUSPENSION CULTURES
FIELD OF THE INVENTION
The present invention relates generally to genetic engineering of plants, and, more particularly, to methods of Agrobacterium-tnediated trans formation.
BACKGROUND OF THE INVENTION
Throughout this application, various patents, published patent applications and publications are referenced. Disclosures of these patents, published patent applications and publications in their entireties are hereby incorporated by reference into this application to more fully describe the state of the art to which this invention pertains. Full bibliographic citations for the publications may be found listed in the Bibliography immediately preceding the claims.
Cotton is an economically important crop. Annual cotton fiber production contributes billions of U.S. dollars to the world=s agricultural economy. While gene transformation of cotton has been possible since 1987 (Firoozabady et al., 1987), the methods used today remain very inefficient and costly due to unusually low rates of plant regeneration from the transformed cells, and low flower fertility. The lengthy regeneration process adds a further drag to the efficiency.
Several methods have been available for Agrobacterium-mediated transformation of a variety of cotton explants, such as cotyledons (Firoozabady et al., 1987), hypocotyls (Umbeck et al., 1987; U.S. Pat. No. 5,004,863 and 5,159,135; European patent publication "EP" 0 270 355), petiole (PCT publication WO 00/77230 Al) and root (PCT Pub. WO 00/53783). Improved methods for cotton plant regeneration and transformation have been reported using hypocotyl transition zones (WO 98/15622), shoot apices (WO 89/12102 and U.S. Pat No. 5,164,310) and apical or nodal meristematic tissues (WO 97/43430). Alternatively, cotton explants can be transformed by microprojectile bombardment, for example, embryonic axes (WO 92/15675 and EP 0 531 506; McCabe and MartineU, 1993) and embryogenic suspension cultures (Finer and Me Mullen, 1990).
Most methods cited above employ a regeneration path of somatic embryogenesis, which requires a lengthy process of initiation, maturation and germination. Transformation of somatic embryogenic callus tissues or embryogenic suspension cultures, either via Agrobacterium-vaedidted transformation (U.S. Patent No. 6,483,013; U.S. Patent No. 5,583,036) or particle bombardment (Finer and Me Mullen, 1990), has substantially shortened the regeneration process. Nevertheless, transformation remains severely hampered by the unusually low conversion rate of somatic embryos to normal rooted plantlets.

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Apart from regeneration, more efficient methods for delivering T-DNA into the host genome have been sought in connection with transformation of plants such as cotton. Extensive investigations have been undertaken in the understanding o£ Agrobacterium virulence and T-DNA conjugation. Today, it is well understood that before T-DNA can be delivered into the plant cells, Agrobacterium cells must recognize and attach themselves to the host cells through complex signaling mechanisms mediated by chemical factors secreted by the host, the production of which is induced by mechanical wounding. These chemical factors consist of a variety of phenolic compounds such as acetosyringone, sinapinic acid (3,5 dimethoxy-4-hydroxycinnamic acid), syringic acid (4-hydroxy-3,5 dimethoxybeozoic acid), ferulic acid (4-hydroxy-3-methoxycinnamic acid), catechol (1,2-dihydroxybenzene), p-hydroxybenzoic acid (4-hydroxybenzoic acid), /3-resorcylic acid (2,4 dihydroxybenzoic acid), protocatechuic acid (3,4-dihydroxybenzoic acid), pyrrogallic acid (2,3,4-trihydroxybenzoic acid), gallic acid (3,4,5-trihydroxybenzoic acid) and vanillin (3-methoxy-4-hydroxybenzaldeh)'de) (U.S. Pat No. 6,483,013). A constitutively expressed wG mutant protein (virGN54D) has been found to enhance Agrobacterium virulence and transformation efficiency. (Hansen et al, 1994). Similarly, chemical compounds, such as acetosyringone or nopaline, that stimulate Agrobacterium virulence, markedly increased transformation efficiency of cotton shoot tips (Veluthambi et al., 1989) and somatic embryogenic callus that was propagated on solid media (U.S. Pat. No. 6,483,013). An example is the successful transformation of a large number of fungi, which are unable to secrete Agrobacterium virulence inducing compounds, making acetosyringone indispensable for T-DNA conjugation (Bundock et al., 1995; de Groot et aL, 1998).
Despite the many past efforts and attempts to improve transformation methods, the techniques used to date remain unproductive, time-consuming and costly. Consequently, some plants, such as cotton, fall a long way behind other major crops in the understanding of molecular mechanisms of plant development and tissue differentiation. Clearly, the current transformation techniques are inconsistent with the economic importance of cotton in particular, and a breakthrough is long overdue.
In the majority of plants, including cotton, transformation methods primarily exploit Agrobacterium to deliver T-DNA into host cells that are confined to a small surface area, i.e., the cut surface of explants or callus (U.S. Pat. No. 6,483,013). This greatly limits the incidence of gene transformation as the majority of host cells are not in direct contact with the T-DNA donor. As a

3
result, only about 20-30% of explants are transformed (Firoozababy et al., 1987; Cousins et al., 1991). Previously, cell suspension cultures have been successfully transformed using a co-culture regime that was based on liquid medium in a AT-tube@ or in a flask (U.S. Pat 5,583,036). While no detailed rate of transformation was shown, we found the method has a similarly low transformation efficiency (Fig. 14). A major problem in the method could be the low T-DNA conjugation efficiency when co-culture was performed in rich liquid medium in which Agrobacterium cells may have difficulty expressing virulence genes and attaching to the plant cells that were put under constant agitation.
In contrast to explants that have been used predominantly for transformation of plants, cells in suspension cultures are present as a single cell or a small clump of cells. Currently, an efficient technique to handle and transform these materials is lacking. Recent studies have suggested that fungal cells cultured in liquid medium can be transformed when co-culture is performed on porous membranes that were laid atop semi-solid medium that had been optimized for Agrobacterium virulence (PCT Pub. WO 02/00896; Bundock et al., 1995; Piers et al., 1996; de Groot et al., 1998). The use of membranes or filters has a twofold advantage. It effectively filters out excessive liquid mat has been carried over, collecting the T-DNA recipient and donor cells while allowing efficient diffusion of nutrients, minerals and signaling compounds between the co-culture and medium.
Finer (1988; European Pat. 0317512 Bl) initiated embryogenesis in low auxin-containing liquid medium (MS salts, B5 Vitamins, 0,1 mg/1 2,4-D or 0.5 mg/1 picloram, 2% sucrose) using undifferentiated calli derived from cotyledon or hypocotyl explants. The embryogenic tissues were then proliferated/maintained in similar liquid medium with a higher auxin content (5 mg/1 2,4-D). The suspension tissues thus prepared may develop into mature embryos in liquid medium if glutamine is present
Rangan et al (U.S. Pat. Nos. 5,583,036 and 5,244,802) initiated somatic embryo formation in high auxin solid medium (1-10 mg/1) and maintained the embryogenic callus in high auxin (1-10 mg/1) liquid medium using differentiated callus derived from cotyledon, hypocotyl explants or zygotic embryos produced on solid medium. The culture contained a mixture of embryogenic cell clumps of various sizes and needed to be filtered regularly to remove larger clumps.
Trolinder and Goodin (1987) initiated embryogenesis in hormone-free liquid medium and maintained the suspension cultures in the same medium. Cells in this type of suspension culture

4
have heterologous developmental stages and are present as large clumps that secrete darkening, growth-inhibiting compounds.
Levee, et al., (1999), and U.S. Pat Application Publication Nos. US2002/0100083 Al, US2002/0083495 Al, and US2002/0092037 Al refer to the use of membranes in the co-culture of pine cells.
There remains a need in the art for improved and more efficient methods of Agrobacterium-mediated transformation and regeneration ofplants, such as cotton, maize, soybean, wheat, rice, and barley.
SUMMARY OF THE INVENTION
To overcome the problems associated with previously reported methods of plant (particularly cotton) transformation, the present invention provides methods for high efficiency plant transformation via Agrobacterium-mediatcd T-DNA conjugation to suspension-cultured cells or calti. The methods described herein employ membranes or filters as solid support for co-culture of T-DNA donor and recipient In particular, the present invention provides a method for producing a transgenic plant, which comprises providing aproembryogenic plant cell and culturing the cell in a liquid medium to produce a cell suspension culture. The suspension culture is co-cultured, on a porous solid support, with a culture of Agrobacterium tumefaciens that harbors a vector comprising an exogenous gene and a selectable marker,, the Agrobacterium being capable of effecting the stable transfer of the exogenous gene and selectable marker to the genome of the cell. A population of cells is thereby generated and those expressing the exogenous gene are selected and regenerated into transgenic plants.
In one aspect, using Green Floresosnt Protein (GFP) as a visual marker, it was discovered that cotton cell cultures could be transformed at surprisingly high efficiency (up to 200 kanamycin-resistaat callus forming units per 200 mg cell mass) and could be regenerated into fertile plants at a much higher efficiency than previously reported.
In another aspect of the invention, previously unexplored tissues, such as cotton root or shoot tips dissected from mature seeds, are used for initiation and maintenance of suspension-cultural cells that maintain embryogenic competence.
Currently, two methods that have bsen disclosed relating to transformation of cotton somatic embryogenic materials via Agrobacierium-mediated T-DNA conjugation are the subject of U.S. Pat

5
No. 5,583,036 and U.S. Pat No. 6,483,013. U.S. Pat. No. 5,583,036 refers to methods for the transformation of suspension cultures by co-cultivating in liquid medium cotton embryogenic callus with Agrobacterium tumefaciens bearing a Ti-plasmid that contained a gene of interest. U.S. Pat. No. 6,483,013 refers to a method for transformation of cotton embryogenic calli that were initiated and propagated on solid high auxin media and wherein the co-cultivation with Agrobacterium tumefaciens was performed on solid media. Both methods employed somatic embryogensis to regenerate fertile cotton plants. Here, as indicated, the invention provides methods for transformation of suspension cell cultures and their regeneration into fertile plants which represent improvements over these methods. In particular, the use of a co-culture technique carried out on a porous solid support, such as a membrane or filter, greatly enhances transformation efficiency in plants. Other aspects of the present invention include the use of various media compositions.
BRIEF DESCRIPTION OF THE FIGURES
Figure 1 shows gene organization of PZP.11 l-35S:GFP. L and R represent the left and right borders, respectively. Plant selection maifaa: gene (NPTII) is under control of CaMV 35S promoter and 35S terminator and GFP is under control of 35S promoter and Nos terminator.
Figure 2 shows the structure of pro-embryogenic calli (S4) propagated in suspension cultures.
Figure 3 shows darkening of suspension cultures and solutions. (A) represents culture S16 cultured constantly in LM1; (B) shows culture S16 rotating in four different media (LM1, LM2, LM3,andLM4).
Figure 4 shows the effects of cytokinins on somatic embryo yield. Approximately 0.1 mg calli mass was plated on either MS medium (basic), or MS supplemented with 0.01 mg/I NAA (NAA), I mg/1 6BA (BA), 1 mg/1 2IP or 1 mg/1 zeatin riboside (ZR). S5 and S16 are two suspension cultures. The number of somatic embryos were scored after one month. Results shown represent the average of three replica plate sets.
Figure 5 depicts the effect of zeatin riboside on somatic embryo production with respect to S5 suspension cultures after two subcultures in Rl medium and one subculture in R2 medium. The panels are as follows: (A) No zeatin riboside in all subcultures; (B) 1 mg/1 zeatin riboside added during the first subculture (only 2 sectors shown); (C) 1 mg/1 zeatin riboside added during the first and second subcultures; (D) 1 mg/1 zeatin riboside added during three subcultures.

6
Figure 6 shows co-culture of T-DNA recipient cells and donor cells on a nylon membrane (Hybond-N).
Figure 7 (A) shows selection on solid Rl medium in sectors; (B) selection on a culture raft in liquid medium; (C) depicts transformed, GFP+ cells 5 days after co-culture.
Figure 8 depicts transformed GFP+ embryos (A) and embryonic tissues (B) one month after culture on selective medium Rl.
Figure 9 shows germinated embryos (A) and embryo-like tissues (B) 4 months after co-culture.
Figure 10 shows plantlets with multiple shoots derived from embryo-like tissue.
Figure 11 shows potting ready plantlets derived from a germinated somatic embryo.
Figure 12 shows healthy flowering plants 7-8 months after co-culture.
Figure 13 shows GFP+ leaves from a transgenic adult leaf (left panel) and background fluorescence from a non-transformed adult plant.
Figure 14 shows callus sectors cultured in selective Rl medium for one month. (A) shows results from co-culture method described in U.S. patent No. 5,583,036. (B) shows results obtained according to the present inventive method.
Figure 15 shows: (A) fresh pollens taken from wildtype (Coker 312) plants; (B) fresh pollen from transgenic plants derived from S16 (C) an aborted boll (from the same plant) with some fertilized ovules containing elongating fibers; (D) an enlarging boll 10 days after pollinating the same plant with wildtype pollens.
DETAILED DESCRIPTION OF THE INVENTION
The present invention relates generally to methods for production of transgenic plants, preferably cotton, maize, soybean, wheat, rice, and barley, and most preferably cotton, that express at least one gene of interest through integration of a copy of the gene in the nuclear genome. In particular, the invention provides a method for producing a transgenic plant, the method comprising providing a proembryogenic plant cell, and culturing the cell in a liquid medium to produce a cell suspension culture. On a porous solid support, the cell suspension culture is co-cultured with a culture of Agrobacterium tumefaciens that harbors a vector comprising an exogenous gene and a selectable marker, the Agrobacterium being capable of effecting the stable transfer of the exogenous gene and selectable marker to the genome of the cell. The co-culturing thereby generates a

7
population of cells. A cell from the population that expresses the exogenous gene can be selected and regenerated into a transgenic plant In an embodiment, the proembryogenic cell is derived from, obtained from, or is part of a callus. The porous solid support is preferably a membrane or a filter, and preferably comprises at least one of nylon, nitrocellulose, cellulose, or glass fibers. In an embodiment, the solid support is soaked in a liquid medium. In an alternate embodiment, the solid support is situated on an appropriate solid medium. The vector may be a plasmid, such as a Ti or Ri plasmid. The methods of the present invention represent an improvement over known methods of Agrobacteriumwediated transformation.
If desired, the resultant transgenic (transformed) plant, can be backcrossed with a germplasm of interest using methods well known in the art. The plant cell employed in the present methods can be from any plant, without limitation, but is preferably a cotton, maize, soybean, wheat, rice, or barley cell, and most preferably cotton. Preferred cotton species include Gossypium kirsutum and Gossypium barbadense. Other plants, including other dicotyledons are also suitable for transformation by the methods of the present invention.
In the present methods, the liquid medium can be a low auxin content medium (in a range, for example, from about 0 to about 0.1 mg/l NAA). Unless otherwise indicated, media used in the culturing steps of the methods described herein can be any media suitable and appropriate for the culture. Many such media are known and available in the art. Selection of cells is by chemical or genetic means, and can include the use of a reporter construct as a selectable marker. Such methods of selection are known in the art. In a preferred embodiment, the reporter construct constitutively expresses green fluorescent protein. A particularly preferred reporter construct is pPZPlll-35S:GFP.
In an embodiment, the proembryogenic cell is obtained by sterilizing a plant seed, germinating the seed to generate pliint tissue, obtaining an explant from the plant tissue, and inducing callus formation from the explant. The seed may be sterilized in a bleach solution, preferably a solution which comprises about 30% bleach. The seed can be germinated in MS medium, and such germination can take place over about 4-14 days. The explant is preferably a root or a shoot tip.
Methods of the present invention can further comprise inducing callus formation and initiating somatic embryogenesis in a solid medium, which can take place over a period of about one to about three months. Moreover, the methods can further comprise inducing differentiation of the

8
callus to generate proembryogenic tissue., and such differentiation can preferably occur on a hormone-free, solid medium for a period of time sufficient to generate proembryogenic tissues, which are preferably suspended, maintained and propagated in a liquid medium or series of liquid media with low auxin content.
The suspension-cultured materials as described above are preferably sub-cultured regularly in a series of fresh media with differences in auxin content and nitrogen sources, and preferably at an interval of about 3 to about 30 days. The liquid media used as above preferably contains MS salt and B5 vitamins supplemented with low concentrations of auxin, preferably about 0-0.1 mg/1 NAA and/or about 0-1 mg/1 picloram. The alternative nitrogen sources, if present, are preferably amino acids, such as glutamine and/or asparagine, and preferably occur at concentrations of about 0.1-5 g/L The solid or liquid media referred to above preferably has a pH value of about 5.8 to about 6.5, preferably about 6.0 to about 6.4. Suspension cultures can be maintained on a rotating platform with a temperature in the range of about 26° to about 32°C and about a 16 hour lighting cycle.
The co-culturing described herein can further comprise growing the Agrobacterium strains of interest in a low phosphate liquid medium, preferably MinAB medium supplemented with an appropriate concentration of virulence inducing agents, to a preferred density of about 0.1-0.5 OD600 units, providing an Agrobacterium with a pre-induced virulence. The culture may be reconstituted in a liquid medium conducive to good growth of T-DNA recipient cells and enhanced expression of Agrobacterium virulence. Alternatively, Agrobacterium strains may be engineered to express constitutively active virA mutants by inserting the gene in either the Agrobacterium genome or Ti or Ri plasmid vectors within the Agrobacterium,
The suspension-cultured materials can be reconstituted in a liquid medium that is optimal for expression of Agrobacterium vir genes and mixed with Agrobacterium culture prepared as described, on a porous solid support, such as a membrane or filter. This mixture can be incubated under constant lighting for about 1-5 days. In an embodiment, the ceils or calli are transferred to hormone-free medium supplemented with appropriate antibiotics to suppress growth of non-transformed plant cells and Agrobacterium cells. The porous solid support can be a membrane, or filter, as described, and can be laid upon a suitable solid medium or soaked in a suitable liquid medium, the media preferably containing either MS salt or MinAB salt supplemented with B5 vitamins and glucose and/or glycerol as a carbon source. These media preferably have a pH value

9
between about 5.7 and about 6.5, preferably between about 5.7 and about 5.9. The co-cultivation preferably takes place at about 18-26°G, and under constant or continuous lighting.
The Agrobacterium culture can be a fresh preparation or one that is cryo-preserved, such as, for example, in the presence of about 0-20% DMSO; about 0-90% glycerol or about 0-5 M sorbitol or any combination thereof.
In an aspect, the invention also provides methods for regeneration of complete plants from pro-embryogenic suspension-cultured materials. Such methods include inducing re-entry into embryogenic development and embryo proliferation by placing suspension-cultured materials, with or without prior co-culture with Agrobacterium, in a hormone-free MS-based medium with reinforced KNO3, and subculturing regularly, such as for example, about every 3-4 weeks, in a medium with the same composition for a period sufficient to produce pre-globular to globular embryos. Further regular subculturing can be undertaken, again, for example, about every 3-4 weeks, in a solid, preferably MS-based medium supplemented with amino acids, preferably glutamine and asparagine at a concentration of about 0.1-5 gA, and reinforced KNO3 for about 4-12 weeks. Root and true leaf formation then can be induced in suitable media and resulting plantlets transferred into soil pots to produce flowering plants. The media included herein may be supplemented with appropriate antibiotics to inhibit growth of non-transformed cells and Agrobacterium cells when co-culture is employed. The subculturing can be performed in liquid medium, membrane-supported liquid medium, solid medium or other appropriate medium. These media preferably have a pH value of about 5.7 to about 6.5, more preferably about 6.0 to about 6.4. The cotton or other plant cells, somatic embryos and plantlets as referred to herein preferably are cultured at a temperature of about 25°-32 °C with about 16 hour lighting cycles, Co-cultured materials can be selected without prior washing.
The invention also provides a method; as an extension and complementation to the methods already described herein, for rescue of infertile plants and accelerated production of commercial varieties comprising manual pollination of the plants, including male sterile plants, with pollens derived from zygotic seeds of either the same variety or a specific germplasm of interest Continued backcrossing in the following generations can be performed as needed or desired.
In preferred methods, the Agrobacterium comprises a virA gene mutant. The virA gene mutant can be incorporated into the genome of the Agrobacterium or incorporated into the vector.

10
In the described methods, the regeneration of cells into plants can be enhanced by addition
of a cytokinin. For cotton, in particular, the cytokinin is preferably a zeatin or derivative thereof.
Moreover, in an embodiment, the proembryogenic plant cell is initiated on a solid medium
comprising a low concentration of 2,4-D and cytokinin. The proembryogenic cell may also be
propagated in a hormone free liquid medium and/or a low auxin liquid medium.
Techniques for introducing exogenous genes into Agrobacterium such that they will be transferred stably to a plant or plant tissue exposed to the Agrobacterium are well-known in the art. It is advantageous to use a so-called "disarmed" strain of Agrobacterium or Ti plasmid, that is, a strain or plasmid wherein the genes responsible for the formation of the tumor characteristic of the crown gall disease caused by wild-type Agrobacterium are removed or deactivated. Numerous examples of disarmed Agrobacterium strain;; are found in the literature (e.g., pAL4404, pEHAlOl and pEH 105 (Walkerpeach & Velten, 1994)). It is further advantageous to use a so-called binary vector system, such as that described in Scliilperoort et al., 1990, 1995. A binary vector system allows for manipulation in £". coli of the plasmid carrying the exogenous gene to be introduced into the plant, making the process of vector construction much easier to cany out
Similarly, vector construction, including the construction of chimeric genes comprising the exogenous gene that one desires to introduce into the plant, can be carried out using techniques well-known in the art Chimeric genes should comprise promoters that have activity in the host in which expression is desired. For example; it may be advantageous to have a series of selectable markers for selection of transformed cells at various stages in the transformation process. A selectable marker (for example a gene conferring resistance to an antibiotic such as kanamycin, cefotaxime or streptomycin) linked to a promoter active in bacteria would permit selection of bacteria containing the marker (i.e., transformants). Another selectable marker linked to a plant-active promoter, such as the CaMV 35S promoter or a T-DNA promoter such as the NPTIINOS promoter, would allow selection of transformed plant cells. The exogenous gene that is desired to be introduced into the plant cell should comprise a plant-active promoter in functional relation to the coding sequence, so that the promoter drives expression of the gene in the transformed plant. Again, plant-active promoters, such as the CaMV 35S, the NPT' II NOS promoter or any of a number of tissue-specific promoters, are well-known in the art and selection of an appropriate promoter is well within the ordinary skill in the art

11
live present method can be used to produce transgenic plants expressing any number of exogenous genes, and is not limited by the choice of such a gene. The selection of the desired exogenous gene depends on the goal of the researcher, and numerous examples of desirable genes that could be used with the present invention are known in the art (e.g., the family of Bacillus thuringiensis toxin genes, herbicide resistance genes such as shikimate synthase genes that confer glyphosate resistance, U.S. Patent No. 5,188,642, or a 2,4-D monooxygenase gene that confers resistance to 2,4-dichlorophenoxyacetic acid (2,4-D) (Bayley et al., 1992), male sterility genes such as the antisense genes of U.S. Patent No. 5,741,684 (Fabijanski, et al.), or even the elaborate crop protection systems described in U.S. Patent No. 5,723,765 (Oliver et al.)).
As evidenced herein, this invention provides, inter alia, methods utilizing different suspension initiation and maintenance procedures. As a non-limiting example, cotton root and shoot tips from mature seed were used as explants for callus induction in the presence of both cytokinin and a low concentration of 2,4-D. A somatic embryogenesis developmental pathway can be switched on upon transferring to hormone-free, high KNO3-content solid medium. Suspension culture of selected callus can be initiated in a liquid medium with a similar composition supplemented with low concentration of auxin (0.01 mg/1 NAA). Such cultures can be maintained at various stages of early embryogenic development depending on the time the callus was transferred to liquid medium. The cell cultures produced may undergo darkening with extended culture if the same medium was constantly used- However, an effective solution for this problem includes rotating the cultures in four variants of media. This allows the cultures to undergo a brief cell differentiation-proliferation cycle thanks to the embryo development-enhancing property of reduced nitrogen sources (Davidonis and Hamilton, 1983). The suspension cultures thus prepared have good synchrony in development and have a uniformly yellowish color. The embryogenic competence varies among different cell lines.
Further provided is a media composition for accelerated regeneration of somatic embryos from cell cultures via treatment with cytokinins that significantly improve early embryogenic development Cytokinins have been found to play an important role in somatic embryogensis (Xing et al., 1999; Sagare et al., 2000; Tokuji and Kuriyama, 2003). Their use in cotton regeneration, however, has never been reported- It was discovered that cytokinins, particularly zeatin riboside, significantly improved somatic embryo formation when used at the early stages of plant regeneration. Proper use of the hormone leads to shorter duration to reproduce complete plantlets

12
due to increased conversion rate to globular stage embryos and accelerated development of leaves. Previously, regeneration of suspension cells was achieved by either culturing the cells in liquid medium or plating them out uniformly on solid media (Finer, 1988; European Pat. 0317512B1, US Pat. 5,583,036). Both methods differ widely from the natural developing environment of zygotic embryos. Furthermore, as the materials need repeated sub-culturing, the plated calli are tedious to work with and slower growing transformants may be selected out during regeneration. This invention thus simplifies the handling process of suspension-cultured cells/calli by partially embedding in solid medium in sectors, which are easier for material transfer between subcultures and the cell clustering in such manner may prevent dehydration during culture in solid media.
Virulence of Agrobactefium is known to be influenced by environmental pH and temperature. Optimal virulence occurs at around pH5.7 below 25°C (Rogowsky, et al., 1987; Fullner and Nester, 1996). These factors have been taken into account to develop medium different from that which has been used for high efficiency transformation of filamentous fungi (Bundock et al., 1995; de Groot et al., 1998), to accommodate healthy growth of plant cells, particularly cotton. Co-culture is performed at around 24°C with pre-induced cultures. Alternatively, Agrobacterium strains maybe engineered to express virA mutants (McLean et al., 1994).
In light of the preceding description, one of ordinary skill in the art can practice the invention to its fullest extent. The following examples, therefore, are merely illustrative and should not be construed to limit in any way the invention as set forth in the claims which follow.
A reporter construct, pPZPl 11-35S:GFP (Xu et al., unpublished data) that constitutively expresses the Green Fluorescent Protein (GFP) (Fig. 1) was used to illustrate the technical processes and monitor the effectiveness of the procedures. As indicated, other suitable markers may also be used.
EXAMPLE 1
Generation of Cotton Suspension Cell Cultures from Explants
Cotton seeds are sterilized by soaking in 30% bleach solution for 45-90 minutes. After thorough rinsing in water, seeds are incubated in water at 28° C tor 1 day and further incubated on SGM medium at 28° C with 16 hours lighting for 4-14 days. Roots are cut into short (3-5 mm) segments and allowed to develop calli on SMI medium for approximately one month. Alternatively, embryogenic shoot tips may be dissected out irom the seeds and used for callus induction. The calli

13
are separated from the explants and further incubated on SMI medium for approximately one month. To induce somatic embryogenisis, the calli are transferred to SM2 medium, subcultured every 3-4 weeks on fresh medium until loosely structured yellowish or reddish calli are obtained. Up to 200 mg of the isolated callus are placed in 50 ml LM1 medium in a suitable container, for example, a 250 ml conical flask or cylinder tissue culture container, and incubated at 28°C on a shaking platform (120 RPM) with 16 hours lighting cycles. The cells/callus tissues are subcultured, typically every 7-14 days by transferring 15 ml of the culture (approximately 2 ml cell mass in a stabilized culture) to 35 ml fresh medium in a new container. Four variants of liquid media (LM1, LM2, LM3 and LM4) are used cyclically.
EXAMPLE 2
Introduction of a Gene of Interest into Cotton Cells
A gene of interest is delivered into cotton cells via Agrobacterium-mediaXed T-DNA conjugation by co-cultivation of freshly subcultured cotton suspension culture with a culture of Agrobacterium that harbors the gene of interest and a dominant selection marker in an appropriate Ti or Ri plasmid vector. The mixtures are co-spotted on a sheet of porous membrane or filter paper laid atop a SIM1 or SIM2 plate for a time sufficient to produce a desired number of transformed cotton cells. Alternatively, 3-4 sheets of filter paper that have been soaked with a liquid medium may be used in place of the solid medium. For best results, pre-induced Agrobacterium culture prepared as described for transformation of filamentous fungi are used although common bacterium cultures may be used (de Groot et aL, 1998).
EXAMPLE 3
Regeneration into Transgenic Cotton Plants from Transformed Cells After co-cultivation, the cells are transferred to Rl medium supplemented with appropriate antibiotics for suppression of non-transformed cotton cells and the Agrobacterium cells that remain attached. Selection of transformed plant cell[s may also be achieved by visual markers. The co-cultured cotton cells need no wash and can be transferred to selective solid medium as callus Asectors® (normally 100-150 per co-culture). Alternatively, each co-culture may be transferred as a whole onto a culture ran in the same medium lacking phytagel (Fig. 7). Culture in liquid medium is normally limited to the initial 3-4 weeks. After that, it preferably is transferred to solid Rl

14
medium. A further 3-4 weeks in medium Rl is normally required so that multiple embryos can be obtained. Further culture in Rl medium is possible if the undifferentiated embryos were not seen. Subsequently, the antibiotic resistant globular or later stage embryos are cultured on R2 medium for 3-4 weeks and this is repeated one more time. Antibiotics may be omitted from the 2nd culture on R2 medium. Fully developed embryos (no root, with cotyledons) or green embryo-like tissues with no obvious cotyledons are transferred to R3 medium and full plantlets are transferred to R4 medium. In about 3-4 weeks, plantlets are planted in soil pots.
EXAMPLE 4
Preparation of Suspension Cell Cultures
Cotton seeds (Coker 312) were sterilized by soaking in 30% bleach (Clorox) solution for 45 minutes and, after two washes in water, incubated in water at 28E C for one day. The seeds were further incubated on SGM medium at 28E C with 16 hours lighting cycles for 4 days. White-colored roots were cut into short (3-5 mm) segments and allowed to develop calli on SMI medium for approximately one month. The calli were separated from the explants and incubated on the same medium for approximately one more montlL Hie calli were transferred to SM2 medium, subcul cured approximately every 3-4 weeks on fresh medium until loosely structured calli were obtained. Approximately 200 mg of the isolated callus were placed in 50 ml LM1 medium in a 250 ml conical flask and incubated at 28° C on a shaking platform (120 RPM) with 16 hour lighting cycles. The suspension cultures were subcultured every 7-14 days by transferring a 15 ml of aliquot (approximately 2 ml cell/calli mass in a stabilized culture) to 35 ml fresh medium in a new container. Among 5 calli selected, three staibilized as vigorous growing yellowish cultures consisting of calli of various sizes when the subculture was performed cyclically in four different media (LMl, LM2, LM3, and LM4). The calli showed no or limited embryogenic structure when examined under a scanning electron microscope (Fig. 2). Severe browning or darkening could occur if a single medium was constantly used (Fig. 3). Cultures S4 and S5 bom successfully developed into somatic embryos when they were transferred to solid medium Rl.

15
EXAMPLE5
Preparation of Cell Suspension Cultures
Cotton seeds were sterilized by soaking in 30% bleach (Clorox) solution for 45 minutes and, after two washes in water, incubated in water at 28E C for 24 hours. The seeds were further incubated on SGM medium at 28E C with 16 hour lighting cycles for 4 days. White-colored roots were cut into short (3-5 mm) segments and allowed to develop calli on SMI medium for one month. The calli were separated from the explants aind cultured on the same medium for approximately one more month. The calli were transferred to SM2 medium and subcultured every 3-4 weeks on fresh medium until loosely structured calli were obtained. Up to 200 mg of the isolated callus were placed in 50 ml LM1 medium in a 250 ml conical flask and incubated at 28° C on a shaking platform (120 RPM) with 16 hour lighting cycles. The suspension cultures were

every 7 days by transferring a 15 ml aliquot (approximately 2ml cell/calli mass when the cultures were stabilized) to 35 ml fresh medium in a new container. Among 3 calli selected, two stabilized as vigorous growing yellowish calli when subculture was performed cyclically in four different media (LM1, LM2, LM3, and LM4). Cultures S15 and S16 both successfully developed into somatic embryos when they were transferred to solid medium Rl.
EXAMPLE 6
Preparation of Cell Suspension Cultures
Cotton seeds were sterilized by soaking in 30% bleach (Clorox) solution for 45 minutes and incubated in water at 28E C for 24 hours after rinsing twice with water. The seeds were further incubated on SGM medium at 28E C with 16 hours lighting cycles for 4 days. White-colored roots were cut into short (3-5 mm) segments and allowed to develop calli on SMI medium for approximately one month. In addition, embiryogenic shoot tips were dissected from the sterilized seeds and used for callus induction as with the root explants. A month later, yellowish calli at the tips of both of kinds of explants were dissected out and incubated in the same medium for one more month. The calli were transferred to SM2 medium, subcultured every 3-4 weeks on fresh medium until loosely structured calli were obtained. Approximately 200 mg of the isolated callus were placed in 50 ml LM1 medium in a 250ml conical flask and incubated at 28° C on a shaking platform (120 RPM) with 16 hours lighting cycles. The suspension cultures were subcultured every 7 days by transferring a 15 ml aliquot (approximately 2 ml cell/calli mass when cultures were stabilized)

16
to 35 ml fresh medium in a new container. All 7 selected calli stabilized as vigorously growing yellowish calli.
EXAMPLE 7
Effects of Cytokinins on Early Embryogenic Development
Approximately 0.1 g of the suspension-cultured calli mass was plated out in medium Rl supplemented with 0.01 mg/1 NAA supplemented either 1 mg/16BA, 2IP or zeatin fiboside. The number of globular or later stage embryos was scored after 5 weeks incubation. In both cultures tested (S5 and SI 6), zeatin riboside treatment led to significant increases in the yield of embryos (Fig. 4).
EXAMPLE 8
Effects of Cytokmins on Early Embryogenic Development
Pro-embryogenic calli were placed in Rl medium with or without 1 mg/1 zeatin riboside. The calli were cultured on the zeatin riboside-containing Rl medium for 1-3 months. A significant increase in the number and sizes of embryos was observed in plates treated with zeatin riboside and the effect became more dramatic with continued exposure to zeatin riboside (Fig. 5 ).
EXAMPLE 9
Transformation of Supension Culture with Induced Agrobacterium Culture Binary T-DNA vector, pPZPl 11-35S:GFP, was introduced into Agrobacterium tumefaciens strain AGL1 by electroporation. A saturated culture of the strain was diluted 5-fold with IM medium and further incubated at 28° C for 6 hours until it reached approximately 0.3 OD600 unit. Approximately 0.5 ml of suspension cultures S5, and S5 that were cultured either in LMl, LM2, LM3 and LM4 was mixed with 0.2 ml Agrobacterium culture and co-spotted on a Hybbond N membrane (Amersham Pharmacia) that was laid atop Rl medium supplemented with 100 pM acetosyringon. After 3 days of co-culture at 24° C with constant lighting, the calli on nylon membranes were nnsed with a suspension medium (e.g., LMl supplemented with 100 mg/I kanamycin and 450 mg/1 Cefotaxim). The whole membrane was transferred to Rl or R2 medium supplemented with 100 mg/I kanamycin and 300 mg/1 Cefotaxime and cultured at 28° C with 16 hour lighting cycles. GFP positive calli were seen after one month. The remaining Agrobacterium

17
culture was dispensed into 0.5 ml aliquots and equal volume of 14% DMSO was added. The bacterium stock was stored frozen at B80° C until use.
EXAMPLE 10
Transformation of Suspension Cultures
Just before use, a tube of the frozen AGL1 culture was thawed and the bacterial cells were collected by centrifugation. The pellets were resuspended in 0.5 ml Cl medium (pH 5.7) mixed with 0.5 ml (approximately 0.2 g cell mass) and co-spotted on a Hybond-N membrane (Amersham Pharmacia) or Whatman 4 filter paper atop CP1 medium (pH5.7). Multiple independent co-cultures (3-4) could be performed on a single membrane (Fig. 6). After co-culture, the cells/calli were transferred (without washing) to medium Rl supplemented with 100 mg/1 kanamycin and 200 mg/1 Cefotaxime and culured at 28°C with 16 hours lighting cycles. Each co-culture was divided into up to 160 sectors, each representing a single large calli or a small clump of micro-calli (Fig. 7A). Alternatively, the whole co-culture was transferred to a culture raft on LM1 supplemented with 100 mg/l kanamycin and 200 mg/1 Cefotaxime (Fig. 7B). Distinct foci of green fluorescence were visible from the 5* day on selective medium (Fig. 7C). After 4 weeks in Rl medium, the kanamycin resistant sectors were transferred individually to solid Rl medium supplemented with the same antibiotics, hi the meantime, the liquid-cultured calli were transferred to solid selective medium Rl. Each sector was examined under fluorescent microscope for green fluorescence at various time points after co-culture. GFP positive somatic embryos started to appear in about one month (Fig. 8). By 3 months after co-culture, up to 38 sectors were found to contain embryos positive for green fluorescence in a single co-culture. Sectors positive for GFP but not yet producing somatic embryos are several folds higher. Both types of co-culture support gave satisfactory results, which are summarized in Table 1.

1. Effects of different Supports and Regeneration Media
Support type 1st medium Total Sector GFP+ GFP+ GFP+ embryos+ GFP+ embryo+
Date 28/5/03 28/5/03 24/6/03 30/7/03 30/7/03 30/8/03 30/8/03
S4G020503-11 HybondN Rl-plate1 120 2 8 14 0 11 1
S4G020503-12 HybondN Rl -plate 160 32 69 61 6 52 20
S4G020503-13 Whatman 4 Rl-plate 180 23 63 72 13 69 38
S4G020503-14 Whatman 4 Rl-plate 100 7 19 28 4" 18 10
S4G020503-1 HybondN Rl-raft2 100 6 39 41 7 36 11
S4G020503-2 HybondN Rl-raft 140 21 114 118 14 94 31
S4G020503-3 Whatman 4 Rl-raft 140 9 39 40 7 33 14
S4G020503-4 Whatman 4 Rl-raft 135 5 8 7 0 8 1
S5G020503-11 HybondN Rl-plate 100 16 72 76 23 61 26
S5G020503-12 HybonRIN Rl-plate 180 31 152 143 29 115 37
S5GO2O5O3-13 Whatman Rl-plate 155 27 108 105 12 88 27
S5G020503.14 Whatman 4 Rl-plate 160 47 135 108 16 97 34
S5G020503-4 Whatman 4 Rl-raft 160 60 135 102 21 90 15
Note: 1. Solid medium Rl with 100 mg/1 kanamycin, 20.0 mg/1 Cefotaxime.
2. Liquid medium Rl with 100 mg/1 kanamycin, 200 mg/1 Cefotaxime. Cultured in Gibco BRL liquid culture system.

19
EXAMPLE 11
Transformation of Suspension Cultures with a pPZPl 11-35S:GFP Construct. A tube of the frozen AGL culture harboring pPZPll l-35S:GFP was thawed and the bacterial cells were collected by centrifugation. The bacterial pellets were resuspended in Cl (pH5.7). Suspension cultures (S4, S5 and S16) were washed in the Cl medium. Approximately 0.5 ml cultures were mixed with 0.4ml Agrobacterium suspension and co-cultured on nylon membranes atop CP1 medium (pH5.7). After co-culture, the calli were transferred (without washing) to medium Rl supplemented with 100mg/l kanamycin and 200 mg/1 Cefotaxime and incubated at 28° C with 16 hour lighting cycles. Each co-culture was divided into up to 160 sectors, each representing a single large calli or a small clump of micro-calli. Alternatively, the whole co-culture was transferred to a culture raft on LM1 supplemented with 100 rag/1 kanamycin and 200 mg/1 cefotaxime. After two months in selective Rl medium, the kanamycin resistant sectors were transferred to fresh Rl plates supplemented with lmg/1 zeatin riboside with the same antibiotics and continued culturing for 4.5 weeks. Kanamycin resistant calli were transferred to R2 medium supplemented with 50 mg/l kanamycin and 200 mg/1 cefotaxime. This is repeated two more times in antibiotics-free R2 medium and large, vigorously growing embryos or green calli, which may appear in the first R2 culture, were selected and transferred to R3 medium. Embryos may germinate and develop roots and true leaves (Fig. 9A). Interestingly, the zeatin treatment allowed many cotyledon-less abnormal embryo and even green tissues, such as those shown in Fig. 9B, to develop into shoots. Often, multiple shoots were developed (Fig, 10). Plantlets that had developed true leaves were plentiful in 3-4 weeks and were cultured in R4 medium for further leaf and root development (Fig. 11). Plantlets with 6-8 leaves were potted in soil and by about 7-8 months after co-culture, the plants started to flower (Fig. 12). Approximately 77% of the adult plants were positive for GFP fluorescence (Fig. 13). Up to 26 healthy plants could be produced from a single co-culture. Of the 18 putative transformants analyzed by Southern blotting analysis, 17 were positive for the GFP transgene (95%) and 7 contained a single transgene (39%). The detailed results of the transformation were shown in Table 2.

table 2. Summary of Transformation Done on 23/5/03.
Date 26/5/03 21/6/03 24/7/03 27/8/03
Sectors Sectors KanRNo. GFP+ KanRNo. GFP+ lstPlantlet Healthy Family First Flower GFP+% plants
Medium R1-K100C R1-K100C R1-ZK50C R1-K50C R4 Soil
S4G230503-2 120 120 41 12 11 7
S4G230503-3 120 120 16 7 6 3
S5G230503-2 120 120 94 23 60 43 13/10/03
S5G230503-3 120 120 68 27 66 44 15/9/03
S16G230503-2 120 120 88 59 72 62 22/9/03 19 26/12/03 89%
S16G230503-3 160 160 138 87 113 97 22/9/03 26 26/12/03 69%
S16G230503-4 160 160 132 89 117 105 22/9/03 26 02/01/04 72%
Note: All the figures represent sector numbers. Healthy family indicates sectors that have developed at least one plant with normal flower plant. R1-K100C: Rl medium with 100 mg/1 kanamycin, 200 mg/1 cefotaxirne R1-K50C: Rl medium with 50 mg/1 kanamycin, 200 mg/1 cefotaxime R1-ZK50C: R1-K50C medium with 1 mg/ml zeatin riboside

21
EXAMPLE 12
Effects of pH in Co-culture Media
Frozen Agrobacterium stocks prepared previously were collected by centrifugation and suspended in Cl with pH adjusted to 5.2,5.7, 5.9 and 6.2. Approximately 0.2 mg suspension cell mass was mixed with 0.4 ml Agrobacterium suspension and co-cultured on nylon membranes atop the corresponding solid medium (CP1, pH 5.2-6.2). Three sets of co-cultures were performed under each condition. The number of sectors showing GFP fluorescence was scored after 2 months culture on selective Rl medium. Significantly better results were obtained with medium pH higher than 5.2. On average, 71%, 81% and 83% of callus sectors were positive for GFP fluorescence in Cl-pH5.2, Cl-pH 5.7 and Cl-pH6.2, respectively.
EXAMPLE 13
Comparison of Co-culture Methods
To determine factors that contributed to the high transformation efficiency obtained with the present methods, we performed transformation of our suspension cell cultures using the method essentially as disclosed previously (U.S. Pat No. 5,583,036). The T-DNA donor preparation, AGL1 strain harboring pPZPl 11-35S:GFP, was made in LB medium. The bacterium cells were collected by centrifugation and resuspended in MS medium supplemented with lmg/1 NAA to 0.5 OD600 unit. Approximately 0.2 g suspension cultures (S5 and SI6) was mixed with 2 ml fresh Agrobacterium culture in a conical flask which was left at 28°C for two hours for the Agrobacterium cells to attach to the suspension cells. After removing the liquid medium, 10 ml MS medium supplemented with 1 mg/1 NAA was added to the flask. The cells were cultured on a shaking platform (100 rpm) for 18 hours. The suspension cells were then washed (twice) with MS medium and placed on selective Rl medium in sectors. In a parallel experiment, the same Agrobacterium strain was prepared freshly with no freezing as described in Example 9. Cultures S5 and S16 were co-cultured as described in Example 10. After 30 days of culture on selective Rl medium, the number of somatic embryos was scored. While about 64% (S5) and 83% (S16) of the calli sector were positive for GFP fluorescence when oo-culture was performed using our method, the rates dropped to only 1% (S5) and 13% (S16) respectively when co-culture was performed in liquid medium in an agitating conical flask (Fig. 14). It is also clear that the kanamycin resistant sector had grown to significantly larger sizes with more embryos developed using a co-culture procedure according to the present invention.

22
EXAMPLE 14
Restoration of Fertility of Transgenic Plants
Self-fertile transgenic plants were obtained with the methods disclosed herein, although some defects in pollen development were seen (Fig. 15). Consequently, manual pollination may be preferred to produce seeds. The majority of plants from S16 were fertile when pollinated by pollens of plants derived from seed (Fig. 15). This can be an advantage, as backcrossing is often required to produce a commercial variety.
Abbreviations and terms used herein:
MS salt (Murashige and Skoog, 1962):
332.02 mg/1 CaCl2 170mg/lKH2PO4 1900mg/lKNO3 180.54 mg/1 MgSO4 128.4 mg/lNaH2PO4 1650mg/lNH4NO3 0.025 mg/I CoCl2.6H20 0.025mg/ICuSO4.5H2O 36.7mg/lFeNaEDTA 6.20 mg/1 H3BO4 0.83 mg/1 KI 16.9mg/IMnSO4.H2O 0.25 mg/I Na2MoO4.2H2O 8.60 mg/1 ZnSO4.7H2O
B5 vitamins
100 mg/l myo-inositol 1 mg/1 nicotinic acid 1 mg/I pyridoxine HCI, lOmg/lthiamineHCl
SGM: Half-strength MS salt and half strength B5 Vitamins, 0.02 mg/1 NAA, 0.1 mg/I MET {multi-effect trizazole), 5 g/I glucose, 2 g/1 phytogel, pH 6,0
SMI: MS salt, B5 vitamins, 0.1 -mgfl Kinetin, 0.05 mg/1 2,4-D, 30 g/1 glucose, 2 g/1 phytogel, pH 6.2
SM2: MS salt, B5 Vitamins, 1.9 g/I KNQ3, 30 g/1 glucose; 2.5 g/I phytogel, pH 6.4

23 LM1: MS salt, B5 Vitamins, 1.9 g/1 KNO3) 0.01 mg/l NAA, 30 g/1 glucose, pH 6.4
LM2: MS salt with no NH4NO3, B5 Vitamins, 1.9 g/1 KNO3, 0.01 mg/1 NAA, 30 g/1 glucose, 1 g/1 glutamine, 0.5 g/1 asparagine, pH 6.4
LM3: MS salt, B5 Vitamins, 0.05 mg/1 NAA, 30 g/I glucose, pH 6.4
LM4: MS salt, B5 Vitamins, 0.01 mg/1 NAA, 0.5 mg/1 picloram, 30 g/1 glucose, pH 6.4
Cl
2.05 g/1 K2HPO4
1.45 g/1 KH2PO4
0.6g/lMgSO4-7H2O
0.5g/l(NH4)2SO4
0.5g^NH4NO3
0.01 g/1 CaCl2
2 g/1 glucose)
0.5 mg/1 ZnSO4-7H2O
0.5 mg/1 CuSO4-5H2O
0.5 mg/1 H3BO3
0.5 mg/1 MnSO4-H2O
0.5mg/lNaMbO4-2H2O
lmg/lFeSO4
B5 Vitamins
0.01 mg/1 NAA
0.5 mg/1 picloram
40mMMES
6.5% glycerol
0-100 /iM acetosyringone
pH 5.7-6.0
CT1: Cl,plus4g/lphytogel.
Ri: MS salt,B5 Vitamins, 1.9 g/1 KNO3,30 g/Lglucose, pH6.4,2.8 g/I phytogel.
R2: MS salt with no NH4NO3, B5 Vitamins, 1.9 g/I KNO3,30 g/1, glucose, 1 g/1 glutamine, 0.5 g/1 asparagine, pH 6.4, 2.8 g/1 phytogel
H3: MS, B5 vitamins, 30 g/1 glucose, 0.01 mg/1 NAA, 3 g/1 phytogel, pH 6.4 R4: Half-strength MS, B5 vitamins

24
MinAB
2.05 g/l K2HPO4
1.45g/lKH2PO4
0.6g/lMgSO4-7H2O
0.3g/lNaCl
0.5 gftXNH^SC^
O.5g/1NH4N03
0.01 g/l CaCl2
2 g/l glucose
0.5 mg/1 ZnSO4-7H2O
0.5 mg/i CuSO4-5H2O
0.5 mg/1 H3BO3
0.5 rag/1 MnSO4-H2O
0.5 mg/1 MbO4-2H2O,
lmg/lFeSO4
pH7.0
IM
2.05 g/l K2HPO4
1.45 g/l KH2PO4
0.6g/lMgSO4-7H2O
O.3g/lNaCl
0.5g/1(NH4)2SO4
0.5 g/l NH4NO3
0.01 g/l CaCl2,
0.5 mg/1 ZnSO4-7H2O
0.5 mg/1 CuSO4-5H2O
0.5 mg/1 H3BO3
0.5 mg/1 MnSO4-H2O
0.5 mg/1 NaMbO4-2H2O,
lmg/lFeSO4
0.5% glycerol
2 g/l glucose
100-200 fiM acetosjringone:
40mMMES
pH5.7
BIBLIOGRAPHY
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Sehilperoort, RA. et al. (1990). Process for the incorporation of foreign DNA into the genome of dicotyledonous plants. U.S. Patent No. 4,940,838.
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26
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WE CLAIM:

1. A method- for producing a transgenic cotton plant, said method comprising: (a) providing a proembryogenic cotton cell;
(b) culturing the proembryogenic .cell in a liquid medium to produce a cell suspension culture;
(c) providing a culture of preinduced Agrobacterium tumefaciens that harbors a vector comprising an exogenous gene and a selectable marker, the Agrobacterium being capable of effecting the stable transfer of the exogenous gene and selectable marker to the genome of a plant cell, wherein the preinduced Agrobacterium tumefaciens is preinduced for virulence;
(d) mixing a portion of the cell suspension culture and a portion of t. e

Agrobacterium culture;

(e) co-culturing the mixture of the cell suspension culture and t.lJe Agrobacterium culture on a porous solid support in contact with a co-culture medium for 1-5 days under continuous light to produce a population of cells some of which have been transformed with the exogenous gene and the selectable marker>

(f) selecting cells that express the exogenous gene from the population of cells;

and

(g) regenerating the selectecells into a transgenic cotton plant by somatic embryogenesis.

2. The method as claimed in claim 1, wherein the proembryogenic cell is derived from callus.

3. The method as claimed in claim 1, wherein said solid support is selected from the group consisting of a membrane and a filter.
4. The method as claimed in claim 1, wherein the porous solid support comprises at least one of nylon, nitrocellulose, cellulose, and glass fibers.

5. The method as claimed in claim 1, wherein the cotton is a member selected from the group consisting of Gossypium hirsutum and Gossypium barbadense.

6. The method as claimed in claim 1, wherein the Agrobacterium is preinduced by culturing the Agrobacterium in the presence of a virulence inducing agent.

7. The method as claimed in claim 1, wherein the Agrobacterium is preinduced by culturing Agrobacterium that constitutively expresses an active virA mutant.

8. The method as claimed in claim 1, wherein the proembryogenic cotton cell is obtained by:
obtaining an explant from a cotton plant; inducing callus formation from the explant; and generating proembryogenic tissue from the callus.

9. The method as claimed in claim 8, wherein the proembryogenic tissue is generated from the callus by initiating somatic embryogenesis of the callus.

10. The method as claimed in claim 8, wherein the proembryogenic tissue is generated from the callus by inducing differentiation of the callus.

11. The method as claimed in claim 8, wherein the explant is obtained by:

sterilizing a cotton seed; and

germinating the cotton seed to generate plant tissue for use as an explant.

12. The method as claimed in claim 11, wherein the plant tissue is a root or a shoot tip.

13. The method as claimed in claim 1, wherein the solid support is in contact with the co-culture medium by soaking the solid support in a liquid co-culture medium.

14. The method as claimed in claim I, wherein the solid support is in contact vvith

the co-culture medium by being laid on top of a solid co-culture medium.

15. The method as ctaimed in claim 1, wherein the co-culture medium in step (e)

comprises MinAB salts, B5 vitamins, acetos)Tingone, glucos•e and glycerol.
16. The method as claimed in claim 1, wherein the co-culture medium in step (e)

comprises MS salts, B5 vitamins, acetOS)Tingone, glucose and glycerol.

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Patent Number

255854

Indian Patent Application Number

3417/KOLNP/2006

PG Journal Number

13/2013

Publication Date

29-Mar-2013

Grant Date

26-Mar-2013

Date of Filing

17-Nov-2006

Name of Patentee

TEMASEK LIFE SCIENCES LABORATORY LTD.,

Applicant Address

1 RESEARCH LINK, THE NATIONAL UNIVERSITY OF SINGAPORE, SINGAPORE 117604, SINGAPORE

Inventors:

#	Inventor's Name	Inventor's Address
1	LIANGHUI,JI	52 WEST COAST CRESCENT #05-08, WEST BAY CONDOMINIUM, SINGAPORE 128036, SINGAPORE
2	LIN,CAI	BIK 715,CLEMENTI WEST STR.2, #07-79,SINGAPORE 120715, SINGAPORE

PCT International Classification Number

A01H4/00; C12N15/82

PCT International Application Number

PCT/SG2004/000101

PCT International Filing date

2004-04-20

PCT Conventions:

#	PCT Application Number	Date of Convention	Priority Country
1			NA